DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15880 and PGAP2

DIOPT Version :10

Sequence 1:NP_608547.2 Gene:CG15880 / 33257 FlyBaseID:FBgn0031283 Length:263 Species:Drosophila melanogaster
Sequence 2:XP_011518294.1 Gene:PGAP2 / 27315 HGNCID:17893 Length:371 Species:Homo sapiens


Alignment Length:250 Identity:51/250 - (20%)
Similarity:83/250 - (33%) Gaps:76/250 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DLQARRHF-RIPVGPILALGLLQLPVCMVYNLVMAITTDFQSTTYTTCNAFNIFPSTSAAAKS-- 79
            |.|...|| |:|          |:|                          |..||.|:|...  
Human   160 DAQEHGHFLRLP----------QVP--------------------------NYLPSVSSAIGGEV 188

  Fly    80 -QHKVWALACYLEFP--FLIASAWLQFRFYRRNLR--------RPVRGFGCLMAIIMAVSSSSVL 133
             |..||.....|...  ||:|     |.::...|.        ||:    |.:...:.|..:..|
Human   189 PQRYVWRFCIGLHSAPRFLVA-----FAYWNHYLSCTSPCSCYRPL----CRLNFGLNVVENLAL 244

  Fly   134 LWGTFPQEDGDSLLH-----ITIALSL---FVSCAIYMAGSFVCAKYYMSDRIGQLHEEFSLRLK 190
            |..|:.....|..:|     :.||.||   .::|.::.    :..|:.:|.     .:..|...|
Human   245 LVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWR----LTKKHTVSQ-----EDRKSYSWK 300

  Fly   191 SGLVLTYYVWVVVMWIFYFIHQKFCFPLAYSVFGMGEFISCECFFIYLCTVYFDF 245
            ..|.:..::........||.|..:|....|::|.:.|:........:..|.::||
Human   301 QRLFIINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDF 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15880NP_608547.2 Frag1 29..248 CDD:431193 44/237 (19%)
PGAP2XP_011518294.1 Frag1 177..358 CDD:431193 41/196 (21%)

Return to query results.
Submit another query.