DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15880 and cwh43

DIOPT Version :10

Sequence 1:NP_608547.2 Gene:CG15880 / 33257 FlyBaseID:FBgn0031283 Length:263 Species:Drosophila melanogaster
Sequence 2:NP_594060.2 Gene:cwh43 / 2542152 PomBaseID:SPAC589.12 Length:971 Species:Schizosaccharomyces pombe


Alignment Length:263 Identity:55/263 - (20%)
Similarity:89/263 - (33%) Gaps:83/263 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLPSSIKDLQARRHF--RIPVGPIL--ALGLLQLPVCMVYNLVMAITTDFQSTTYTTCNAFNIFP 71
            ||.|||    |:..|  ..|:.|||  ..|..|:|..:|..:...|...|. ...||.||...| 
pombe   404 LLASSI----AKYSFFSNNPIWPILNETNGGKQIPALIVGIIACLIFAIFH-VQQTTANAVEHF- 462

  Fly    72 STSAAAKSQHKVWALACYLEFPFLIASAWLQFRFYRRNLRRPVRGFGCLMAIIMAVSSSSVLLWG 136
                   ...|:.||:..|....::..               :..|.|...::|..|.....:.|
pombe   463 -------KLRKITALSAALSLGTVLFC---------------LHTFLCDSTVLMTWSWDGYPIKG 505

  Fly   137 TFPQEDGDSLLHITIALSLFVS-CAI------YMAGSFVCAKYYMSDRIGQLHEEFSLRLKSGLV 194
            ..|...|        |:|:.|| ||:      |.:|:|:..                     |.|
pombe   506 PQPYPHG--------AVSIVVSICAVLVAPYLYQSGAFMLI---------------------GFV 541

  Fly   195 L----TYYVWVVVMWIFY---FIHQKFCFPLAYSVFGMGEFISCE-----CFFIYLCTVYFDFYH 247
            |    :|::::...|..|   .|...:....:::...:..|.|..     .|.:|   :.:...|
pombe   542 LACFGSYFMYINHGWCSYLGGLIFTSYVLIYSFASIRISSFYSPAKVWGGAFLVY---ILYSLAH 603

  Fly   248 VYI 250
            |::
pombe   604 VWV 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15880NP_608547.2 Frag1 29..248 CDD:431193 45/239 (19%)
cwh43NP_594060.2 Frag1 14..220 CDD:431193
ElsH <783..>858 CDD:442789
Blue background indicates that the domain is not in the aligned region.

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