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Protein Alignment CG15880 and Pgap2
DIOPT Version :9
Sequence 1: | NP_608547.2 |
Gene: | CG15880 / 33257 |
FlyBaseID: | FBgn0031283 |
Length: | 263 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006229887.1 |
Gene: | Pgap2 / 116675 |
RGDID: | 619744 |
Length: | 339 |
Species: | Rattus norvegicus |
Alignment Length: | 154 |
Identity: | 36/154 - (23%) |
Similarity: | 59/154 - (38%) |
Gaps: | 18/154 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 RRHFRIPVGPILALGLLQLPVCMVYNLVMAITTDFQSTTYTTCNAFNIFPSTSAAAKS---QHKV 83
|..|...|..::...|.....|::::||. .|:.|..|.|...|..||.|:|... |..|
Rat 89 RLRFTAFVWWVITFPLFGFFFCIIWSLVF----HFEYTVATDCGVPNYLPSVSSAIGGEVPQRYV 149
Fly 84 WALACYLEFPFLIASAWLQFRFYRRNLRRPVRGFG--CLMAIIMAVSSSSVLLWGTFPQEDGDSL 146
|.....|.......:|:..:..| .:...|..|:. |.:...:.|..:..||..|:.....|..
Rat 150 WRFCIGLHSAPRFLTAFAYWNHY-LSCASPCPGYRLLCRLNFSLNVVENLALLVLTYVSSSEDFT 213
Fly 147 LH-----ITIALSL---FVSCAIY 162
:| :.||.|| .::|.::
Rat 214 IHENAFIVFIAASLSYMLLTCILW 237
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG15880 | NP_608547.2 |
Frag1 |
32..247 |
CDD:287278 |
33/144 (23%) |
Pgap2 | XP_006229887.1 |
Frag1 |
102..>253 |
CDD:402067 |
33/141 (23%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166341323 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR12892 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.940 |
|
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