DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex12 and PEX12

DIOPT Version :9

Sequence 1:NP_001259844.1 Gene:Pex12 / 33256 FlyBaseID:FBgn0031282 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_013739.1 Gene:PEX12 / 855041 SGDID:S000004628 Length:399 Species:Saccharomyces cerevisiae


Alignment Length:353 Identity:75/353 - (21%)
Similarity:132/353 - (37%) Gaps:95/353 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PSIFEISASETLDNLIYPALSKIFDYFGLRLDFKLWGSLRIQE---ELSPLLTWLLQYLYLRKRA 76
            |:||||.:|:.:|:|: ||..:......|..:|....:||:.:   |....:...:::.:|:...
Yeast    32 PTIFEIMSSQEIDSLL-PASIRYLLANHLVANFPNRYTLRLNKYFFEWFQAIKGFVEWYHLKTYN 95

  Fly    77 SSFGESFYGLQ------RTVTTT-------------GDLLNRRQQFASATLLTFMPYVERKL--- 119
            |:|.:.|||||      |.:..|             |..||::|:.........:||:..||   
Yeast    96 STFIDRFYGLQLFSSRDRNLALTQCLNPKGQSEWPQGLQLNQQQKSVIFLEKIILPYITAKLDEI 160

  Fly   120 ------RTRITRHEDTSPWEQRLLSAFHAFHAAKAAHT--------------------FFYLVKY 158
                  ....:..|..:.|.:|.....:.|.....|.:                    :.:.::|
Yeast   161 LEKISMNNIFSSDETENKWPKRAFLRIYPFIKKLLALSNLLVKLLFLTKRTGSVSLLQYLFKIEY 225

  Fly   159 A------------------------SNHSPIFRL----LGLTLRYPSEPPKEDQWTYVVLKMLEV 195
            .                        :|.|.||.|    |.:..|:         .|::..:....
Yeast   226 TTVRPLSSELSGLKETKGMDNRLRKTNISSIFALMQGQLSIIPRF---------LTFMGSQFFPT 281

  Fly   196 LAFFLQFVQWWYSNDQRRKVGGTLIN-PEAMPRKQLPKEVQQSLPQRG---ECPVCLLSIQTPTA 256
            ..|.|:..|||.:.|...|:...:.: .|.:||........::..:.|   .||||..::|.|..
Yeast   282 FIFVLRVYQWWTTQDMTTKLQKRVNDLDEDIPRPPFSSHSDKTEDKEGVSEACPVCEKTVQNPCV 346

  Fly   257 CSVSGYVFCWKCIVSHM-KEHGTCPVTH 283
            .. :|||.|:.|.:|:: ...|.||||:
Yeast   347 LE-TGYVACYPCAISYLVNNEGHCPVTN 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex12NP_001259844.1 Pex2_Pex12 24..209 CDD:282595 46/263 (17%)
zf-RING_2 242..281 CDD:290367 15/42 (36%)
PEX12NP_013739.1 Pex2_Pex12 41..295 CDD:398431 46/263 (17%)
mRING_PEX12 334..375 CDD:319365 17/41 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342121
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0826
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 52 1.000 Inparanoid score I1828
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55389
OrthoFinder 1 1.000 - - FOG0005079
OrthoInspector 1 1.000 - - oto99985
orthoMCL 1 0.900 - - OOG6_103569
Panther 1 1.100 - - LDO PTHR12888
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R900
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.790

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