DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex12 and prx-12

DIOPT Version :9

Sequence 1:NP_001259844.1 Gene:Pex12 / 33256 FlyBaseID:FBgn0031282 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001309444.1 Gene:prx-12 / 181331 WormBaseID:WBGene00004197 Length:344 Species:Caenorhabditis elegans


Alignment Length:331 Identity:92/331 - (27%)
Similarity:147/331 - (44%) Gaps:60/331 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PSIFEISASETLDNLIYPALSKIFDYFGLRLDFKLWGSLRIQ---EELSPLLTWLLQYLYLRKRA 76
            ||:|:|.|.|.|...|.|||..:..|...   ||....|.:.   :|...:...:||..|||...
 Worm    23 PSVFDIIAQENLATSIRPALQHLVKYLAF---FKPKTFLSVHRNFDEYYIIFDLILQNHYLRNYG 84

  Fly    77 SSFGESFYGLQRTVTTTGDLLN-RRQQFASATLLTFMPYVERKLRTRITRHEDTSPWEQRLLSAF 140
            :||.|:||.::|..:.||:..| .|::..|...|...||||.||.....|.::.  :|.|..|:.
 Worm    85 ASFTENFYSMKRIASGTGNPPNDGRERIMSLITLVGWPYVENKLNQLYDRLKEV--YECRSWSSI 147

  Fly   141 H-------------------AFHAAKAAHTFFYLVKYASNHSPIFRLLGLTLRYPSEPPKEDQ-- 184
            :                   |..|.|:|....|::..:|.|||.....|:.|::.:  |::.:  
 Worm   148 NGMKAKCQKMFVIIWPYIKTALKAVKSALQLAYILNRSSIHSPWLYFSGVILKHLT--PEDLEAF 210

  Fly   185 ---------------WTY------VVLKMLEVLAFFLQFVQWWYSNDQRR--KVG--GTLINPEA 224
                           |.:      :|.::.....||:||:.:.|:.|..:  |.|  |.:.:|  
 Worm   211 NAVPLHLQTGFFNRIWRFILGLPGIVSRLFAYGLFFVQFLDYMYNTDLAKLTKTGLDGAIPSP-- 273

  Fly   225 MPRKQLPKEVQQSLPQRGECPVCLLSIQTPTACSVSGYVFCWKCIVSHMKEHGTCPVTHYPISLD 289
             |.|.:..|.:.......:||:||......||..|||||||:.||..::..:..||||..|.::.
 Worm   274 -PHKMIISESEILSLDTNKCPICLKKRVNDTALFVSGYVFCYTCINQYVNTYNKCPVTGCPANVQ 337

  Fly   290 DLVRIY 295
            .|:|::
 Worm   338 HLIRLF 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex12NP_001259844.1 Pex2_Pex12 24..209 CDD:282595 57/230 (25%)
zf-RING_2 242..281 CDD:290367 16/38 (42%)
prx-12NP_001309444.1 Pex2_Pex12 31..256 CDD:282595 57/231 (25%)
RING 292..329 CDD:214546 16/36 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157718
Domainoid 1 1.000 57 1.000 Domainoid score I7286
eggNOG 1 0.900 - - E1_KOG0826
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H240
Inparanoid 1 1.050 102 1.000 Inparanoid score I3559
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55389
OrthoDB 1 1.010 - - D1204472at2759
OrthoFinder 1 1.000 - - FOG0005079
OrthoInspector 1 1.000 - - oto18283
orthoMCL 1 0.900 - - OOG6_103569
Panther 1 1.100 - - LDO PTHR12888
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R900
SonicParanoid 1 1.000 - - X5424
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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