DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Saf6 and TAF6B

DIOPT Version :9

Sequence 1:NP_608545.1 Gene:Saf6 / 33255 FlyBaseID:FBgn0031281 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001322136.1 Gene:TAF6B / 841877 AraportID:AT1G54360 Length:540 Species:Arabidopsis thaliana


Alignment Length:611 Identity:108/611 - (17%)
Similarity:183/611 - (29%) Gaps:222/611 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 LSQDVCARLAEDASYKVWELINNVKIYSRHS--GGVVTYDLVNEVLKDADVPPMLGAMDSDWDRI 209
            ||.||.|.||.|..|:|.|::.......||:  ..::.:| |:..|...::.....::...:..:
plant    33 LSPDVSAALAPDVEYRVREVMQEAIKCMRHARRTTLMAHD-VDSALHFRNLEVSSSSLLLLFHTV 96

  Fly   210 DYDGSFYFHSDKIFELSAEFQKEVNLCTPDDADFQSICPVEDKHMDQLRQCVQSLVTAALFADSK 274
            |.|..|:.:|..:              .|.....:.:...|.......:.....:::..|:    
plant    97 DPDFDFFLYSLPL--------------APKVCGSRELLRTEIYTSSMTKMSSSRMLSKLLY---- 143

  Fly   275 SQTAAVCHAF---------------QTPLM-------------GSIYRVIVSKMVQLLAFKQQDH 311
             |...:.|.|               .:||.             |...|.::||.:|:...|..: 
plant   144 -QMHLLMHLFSHWLAIDGIQPSIPQNSPLQAISDLKRSEYKDDGLAARQVLSKDLQIYFDKVTE- 206

  Fly   312 LSQRCWRLLRACNYNATANHNACRPEYFNLAEVLVSQLMAPYETIKAPHVDPD-----PGQTTSI 371
                 |.|.::                   ...|..|.:|..|      :||.     |..|:.|
plant   207 -----WALTQS-------------------GSTLFRQALASLE------IDPGLHPLVPFFTSFI 241

  Fly   372 KMEFEEELKVEP----------DQCHNPETQENPEVMGVEKQEQEPQMFPGESTMEHTIYKLQSE 426
            ..|..:.:...|          ...|||.....|.:         .|:.|  |.:...|.|    
plant   242 AEEIVKNMDNYPILLALMRLARSLLHNPHVHIEPYL---------HQLMP--SIITCLIAK---- 291

  Fly   427 EEELNPQPEAEH--LSSYFACPVGNGLVDELCETIGQLASQSGYLHAECLFLIKRRLARFFEGRH 489
              .|..:....|  |.::.|            .|:.....:.|:::...|..:.|.|...|    
plant   292 --RLGRRSSDNHWDLRNFTA------------STVASTCKRFGHVYHNLLPRVTRSLLHTF---- 338

  Fly   490 VSSERDFRYISRAVRGLIALGEYAFREFIPYIYKLRVEEIPDSLWPDLAPAAIFLGGHDDVYLYE 554
            :...:.......|::|::|||....|..:               .|:|.|..:.|       |.|
plant   339 LDPTKALPQHYGAIQGMVALGLNMVRFLV---------------LPNLGPYLLLL-------LPE 381

  Fly   555 ---------------WLEYGCGAALQPFLVHYARA-YEKMVTRRYVKAKQPAYRIESVPGVRRLE 603
                           ||.||.      .:|...|. ||::.|...:.:...:    ||       
plant   382 MGLEKQKEEAKRHGAWLVYGA------LMVAAGRCLYERLKTSETLLSPPTS----SV------- 429

  Fly   604 WSTLAAAMCHGDDPSKALKPKPTLCEAFPD--LQSPNLQLNCAGNI------RFKFAGCRPVLLK 660
            |.|          ..|...|:.:..:|..|  ...|.|:....|.|      :.:..|       
plant   430 WKT----------NGKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSTQMQMRG------- 477

  Fly   661 PKVATVP---HSE------DSPSSAA 677
              ..|||   |::      :|||:.|
plant   478 --TTTVPQQSHTDADARHHNSPSTIA 501



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10221
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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