DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Saf6 and TAFII59

DIOPT Version :9

Sequence 1:NP_608545.1 Gene:Saf6 / 33255 FlyBaseID:FBgn0031281 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001030969.1 Gene:TAFII59 / 839370 AraportID:AT1G04950 Length:549 Species:Arabidopsis thaliana


Alignment Length:609 Identity:113/609 - (18%)
Similarity:168/609 - (27%) Gaps:274/609 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 LSQDVCARLAEDASYKVWELINNVKIYSRHS-GGVVTYDLVNEVLKDADVPPMLGAMDSDWDRID 210
            |..:....||.|..|:|.|::.......||| ...:|...|:..|...:|.|:.|....      
plant    21 LLPEAALMLAPDVEYRVREIMQEAIKCMRHSKRTTLTASDVDGALNLRNVEPIYGFASG------ 79

  Fly   211 YDGSFYF-----HSDKIFELSAEFQKEVNLCTPD-DADFQSI--CPVEDKHMDQLRQCVQSLVTA 267
              |.|.|     |.|..:             |.| :.||:.:  .|:....:|            
plant    80 --GPFRFRKAIGHRDLFY-------------TDDREVDFKDVIEAPLPKAPLD------------ 117

  Fly   268 ALFADSKSQTAAVCHAFQTPLMGSIYRVIVSKMVQLLAFKQQDHLSQRCWRLLRACNYNATANHN 332
                     |..|||                                  |..:.........|  
plant   118 ---------TEIVCH----------------------------------WLAIEGVQPAIPEN-- 137

  Fly   333 ACRPEYFNLAEVLVSQLMAPYETIKAP-----HVDPDPGQTTSIKMEFEEELKVEPDQCHNPETQ 392
                              ||.|.|:||     |...| |....:::..:..|..|. |.:..:..
plant   138 ------------------APLEVIRAPAETKIHEQKD-GPLIDVRLPVKHVLSREL-QLYFQKIA 182

  Fly   393 ENPEVMGVEKQEQEPQMFPGESTMEHTIYKLQSEEEELNPQPEAEHLSSYFACPVGNGLVD---- 453
            |      :...:..|.::      :..:..|.|:.   ...|...:.:::.|..|.|||.|    
plant   183 E------LAMSKSNPPLY------KEALVSLASDS---GLHPLVPYFTNFIADEVSNGLNDFRLL 232

  Fly   454 -ELCETIGQLASQSGYLHAE------------CLFLIKRRLARFFEGRHVSSERDF--------- 496
             .|...:..|. |:.::|.|            |  |:.|:|...|...|... |||         
plant   233 FNLMHIVRSLL-QNPHIHIEPYLHQLMPSVVTC--LVSRKLGNRFADNHWEL-RDFAANLVSLIC 293

  Fly   497 -RY----------ISR------------------AVRGLIALGEYAFREFI-----PYIYKLRVE 527
             ||          ::|                  |::||.|||....|..|     ||:..|.  
plant   294 KRYGTVYITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSNLEPYLSLLE-- 356

  Fly   528 EIPDSLWPDLAPAAIFLGGHDDVYLYE-WLEYGCGAALQPFLVHYARAYEKMVTRRYVKAKQPAY 591
                   |:|....    ..:.:.:|| |..|  ||.|:                          
plant   357 -------PELNAEK----QKNQMKIYEAWRVY--GALLR-------------------------- 382

  Fly   592 RIESVPGVRRLEWSTLAAAMC-HGDDPSKALKPKPTLCEAFPDLQSPNLQLNCAGNIRFKFAGCR 655
                            ||.:| ||     .||       .||.|.||:......|..:.|.    
plant   383 ----------------AAGLCIHG-----RLK-------IFPPLPSPSPSFLHKGKGKGKI---- 415

  Fly   656 PVLLKPKVATVPHSED-SPSSAAN 678
                   ::|.||... |..|:.|
plant   416 -------ISTDPHKRKLSVDSSEN 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Saf6NP_608545.1 None
TAFII59NP_001030969.1 TAF6 1..383 CDD:227426 93/535 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10221
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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