DRSC/TRiP Functional Genomics Resources

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Protein Alignment Saf6 and taf6l

DIOPT Version :9

Sequence 1:NP_608545.1 Gene:Saf6 / 33255 FlyBaseID:FBgn0031281 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001186651.1 Gene:taf6l / 557363 ZFINID:ZDB-GENE-030131-6789 Length:641 Species:Danio rerio


Alignment Length:622 Identity:124/622 - (19%)
Similarity:210/622 - (33%) Gaps:170/622 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 QKSYAGFDPRSIKIFWEQHDQTDVELSQDVCARLAEDASYKVWELINNVKIYSRHS-GGVVTYDL 185
            ::.:|.....|:|:..|   ...||||:::...||||..|::.|...|...:.||: ...::.:.
Zfish     6 ERRFAEVPRESVKLMAE---SAGVELSEELAGLLAEDVCYRLREATQNSSQFMRHAKRRKLSVED 67

  Fly   186 VNEVLKDADVPPM--LGAMDSDWDRIDYDGSFYFHSDK---IFELS---------AEFQKEVNLC 236
            .|..|:.::...:  .||.|:...|...:|..::..|:   :.||:         ||....|::.
Zfish    68 FNRALRWSNTETVCGYGAQDALPFRPLKEGELFYVEDREINLVELALATNIPKGCAETMVRVHVS 132

  Fly   237 TPD---DADFQSICPV------ED--KHMDQLRQCV-----QSLVTAALFADSKSQTAAVCHAF- 284
            ..|   :.:.|...|.      ||  |:..|:.:.:     ..:..|.|...|.|:.||:...| 
Zfish   133 YLDGKGNLEPQGTVPTAVQSLSEDLLKYYQQITRAILGEDPHLMKVALLDLQSNSKIAALLPYFV 197

  Fly   285 ---------------------------QTP--LMGSIYRVIVSKMVQLLAFKQQDHLSQRCWRLL 320
                                       |.|  .:||..|.:||.::.             |....
Zfish   198 YVISGVKSVSHDLDQLNRLLHMVKSLVQNPYLYLGSYVRSLVSSVMY-------------CILEP 249

  Fly   321 RACNYNATANHNACRPEYFNLAEVLVSQLMAPYETIKAPHVDPDPGQTTSIKMEFEEELKVEPDQ 385
            .|.:.|...:|...|    :.|.:|:|.:.       ..|.|...|....|.:..::.|. :|.:
Zfish   250 LAASINPLNDHWTLR----DYAALLLSHIF-------WTHGDLVSGLYHQILLSLQKVLS-DPVR 302

  Fly   386 CHNPETQENPEVMGVEKQEQEPQMFPGESTMEHTIYKLQSEEEELNPQPEAEHLSSYFACPVGN- 449
               |.......|:|:...        |...:|..:|               .||.:|:|    | 
Zfish   303 ---PLCSHYGAVVGLHAL--------GWKAVERVLY---------------PHLPAYWA----NL 337

  Fly   450 -GLVDELCETIGQLASQSGYLHAECLFLIKRRLARFFEGRHVSSERDFRYISRAVRGLIALGEYA 513
             .::|:...:..|:.:....::...|..::|.|........:::|.....:|.:|.|.:     .
Zfish   338 QAVLDDYSVSNAQVKADGHKVYGAILVAVERLLKMKALSLTLAAEGGSAALSGSVTGAV-----G 397

  Fly   514 FREFIPYIYKLRVEEIPDSL-WPDLAPAAIFLGGHDDVYLYEWLEYGCGAALQPFLVHYARAYEK 577
            |||..|     .:...|:.| .|.|..|:....|.......||......|.       |...|..
Zfish   398 FRENSP-----GLSPPPEPLSEPPLGIASHLQAGGAGCPWEEWTPVSLPAM-------YCELYSF 450

  Fly   578 MVTRRYVKAKQPAYRIESVPGVRRLEWSTLAAAMCHGDDPSKALKPKPTLCEAFPDLQSPNL--Q 640
            .       ....|.|..:.|        .||.|...|  ||:.|:.:.....|.|:|:|...  |
Zfish   451 F-------GDSLAVRFSTDP--------PLAGAAPAG--PSQPLEGRKETATAAPNLESTRKMPQ 498

  Fly   641 LNCAGNIRFKFAGCRPVLLKPKVATVPHSEDSPSSAA 677
            |..:.||            .|:....|.:|..|.|.|
Zfish   499 LTASMNI------------SPRQDGSPRTEPQPPSLA 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Saf6NP_608545.1 None
taf6lNP_001186651.1 TAF6 13..322 CDD:173968 68/347 (20%)
Globin_like 316..>380 CDD:304364 13/90 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10221
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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