DRSC/TRiP Functional Genomics Resources

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Protein Alignment Saf6 and taf6l

DIOPT Version :10

Sequence 1:NP_608545.1 Gene:Saf6 / 33255 FlyBaseID:FBgn0031281 Length:717 Species:Drosophila melanogaster
Sequence 2:XP_002933255.1 Gene:taf6l / 100486266 XenbaseID:XB-GENE-1000128 Length:574 Species:Xenopus tropicalis


Alignment Length:241 Identity:53/241 - (21%)
Similarity:86/241 - (35%) Gaps:61/241 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 MGH--QKSYAGFDPRSIKIFWEQHDQTDVELSQDVCARLAEDASYKVWELINNVKIYSRHS-GGV 180
            |.|  .:.|......|:::..|   ...::::.:|.|.||||..|::.||........||| ...
 Frog     1 MSHTEDRRYVELCQDSVRLTAE---SVGLDITDEVAALLAEDVCYRLRELTQFSAQCLRHSRRRR 62

  Fly   181 VTYDLVNEVLKDADVPPML--GAMDSDWDRIDYDGSFYFHSDKIFELSAEFQKEVNLC------- 236
            :|.:..|..|:.::|..:.  |:.||...|...||..::..|          :|:||.       
 Frog    63 LTVEDFNRALRWSNVEAVCGHGSPDSVTYRSIKDGDCHYTED----------REINLVELALATN 117

  Fly   237 ----TPDDADFQSICPVEDK----HMDQLRQCVQSL----------VTAALFADSKSQTAAVCHA 283
                ||:.|....:..::.|    |...:...|..|          ||.|:..|...........
 Frog   118 IPKGTPETAVRVHVSYLDGKGNLEHQGTVPAAVSLLTDDLLKYYQRVTRAVLGDDPHLMKVALQD 182

  Fly   284 FQTPLMGSIYRVIVSKMVQLLAF--------KQQDHLSQRCWRLLR 321
            .||.          ||:..||.:        |...|..::..|||:
 Frog   183 LQTN----------SKIAALLPYFVYVVSGVKSVSHDLEQLSRLLQ 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Saf6NP_608545.1 HFD_TAF6L 128..200 CDD:467056 18/74 (24%)
taf6lXP_002933255.1 HFD_TAF6L 12..82 CDD:467056 18/72 (25%)
TAF6C 151..364 CDD:381749 16/78 (21%)
HEAT repeat 155..186 CDD:381749 5/30 (17%)
HEAT repeat 193..225 CDD:381749 6/26 (23%)
HEAT repeat 235..277 CDD:381749
HEAT repeat 284..316 CDD:381749
HEAT repeat 318..363 CDD:381749
Blue background indicates that the domain is not in the aligned region.

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