DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp21E2 and rhlB

DIOPT Version :10

Sequence 1:NP_608544.1 Gene:Dbp21E2 / 33254 FlyBaseID:FBgn0086130 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_418227.1 Gene:rhlB / 948290 ECOCYCID:EG10844 Length:421 Species:Escherichia coli


Alignment Length:351 Identity:108/351 - (30%)
Similarity:162/351 - (46%) Gaps:19/351 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 IHPQLLENLRVELGIKLLTGIQKQGMPVVHGNEHCLIAAETGCGKTITYLLPIVDKLLQKEVVTE 179
            :||:::|.|. :.|....|.||...:|:..........|:||.|||:.:|......||....:.:
E. coli    16 LHPKVVEALE-KKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIAD 79

  Fly   180 RKLNTPRVLILTPGRELATQIAGVTEKLTQGTNLKVQSLLGGNTKQLMMNPQFEEVDILVATLGA 244
            ||:|.||.||:.|.||||.||....|.|.:.|.||:....||:.....:......||||:.|.|.
E. coli    80 RKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGR 144

  Fly   245 LSKLVTTGIYRMEQVRHLVLDEADTLLDDTFTDKLSYFLRRFPFHLVQKEDAGTQM-ILASATMP 308
            |..........:..::.:||||||.:.|..|...:.:..||.|       .|..:: :|.|||:.
E. coli   145 LIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMP-------PANQRLNMLFSATLS 202

  Fly   309 TNTREILHKVIDVDTIREVVSPHL---HRLMSHVTQKFLRLSKADRPATLLSLVKHDLAKRRPLI 370
            ...||:..:.::.....| |.|..   ||    :.::....|..::...|.:|::.:...|  .|
E. coli   203 YRVRELAFEQMNNAEYIE-VEPEQKTGHR----IKEELFYPSNEEKMRLLQTLIEEEWPDR--AI 260

  Fly   371 VFSNKSTTSDFVSIFLNNSGVNCLNLNGDMLMKIRLGRFEQFQNGHCDVLSTTDVGSRGLDTTRA 435
            :|:|.....:.:...|...|.....|.||:..|.||...::|..|..|:|..|||.:|||.....
E. coli   261 IFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAV 325

  Fly   436 RHVVNFDFPLHVSDYIHRCGRIGRVG 461
            .||.|:|.|....||:||.||.||.|
E. coli   326 THVFNYDLPDDCEDYVHRIGRTGRAG 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp21E2NP_608544.1 DEADc_DDX28 119..345 CDD:350706 67/229 (29%)
SF2_C_DEAD 339..462 CDD:350174 39/123 (32%)
rhlBNP_418227.1 PRK04837 2..420 CDD:235314 108/351 (31%)

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