Protein Alignment Dbp21E2 and RRP3

DIOPT Version :10

• Sequence 1: NP_608544.1
• Gene: Dbp21E2 / 33254
• FlyBaseID: FBgn0086130
• Length: 536
• Species: Drosophila melanogaster
• Sequence 2: NP_011932.2
• Gene: RRP3 / 856462
• SGDID: S000001107
• Length: 501
• Species: Saccharomyces cerevisiae
• Alignment Length: 516
• Identity: 137/516 - (26%)
• Similarity: 227/516 - (43%)
• Gaps: 77/516 - (14%)

  Fly    27 VKTKPPKAK----SKGKKQKGEPLISCRRSQFDLTQYE-----QTDAKFGSLSLASKGWLHNKSK 82
            ||.|..||.    |..:|.:.:.|    .:|..|.:.|     ::|:: ...:...|..|.:|||
Yeast     5 VKRKEKKANDELTSLAEKIRAKAL----ENQKKLIEAEKEGGSESDSE-EDATAEKKKVLKSKSK 64

  Fly    83 GDFFILNASVRGEELQQEMQTVDEFLES-TGMQIHPQLLENLRVELGIKLLTGIQKQGMPVVHGN 146
            ...          ..|.|....||..|| :.:.:.|:|::..: .|.....|.||.:.:|.....
Yeast    65 STV----------STQNENTNEDESFESFSELNLVPELIQACK-NLNYSKPTPIQSKAIPPALEG 118

  Fly   147 EHCLIAAETGCGKTITYLLPIVDKLLQKEVVTERKLNTPRVLILTPGRELATQIAGVTEKLTQGT 211
            ...:..|:||.|||..:.:||:::|...:       ......||.|.||||.||....:.|....
Yeast   119 HDIIGLAQTGSGKTAAFAIPILNRLWHDQ-------EPYYACILAPTRELAQQIKETFDSLGSLM 176

  Fly   212 NLKVQSLLGG-----NTKQLMMNPQFEEVDILVATLGAL-SKLVTTGIYRMEQVRHLVLDEADTL 270
            .::...::||     ..:.||..|.     |::||.|.| ..|..|..:.:.:::.||:||||.|
Yeast   177 GVRSTCIVGGMNMMDQARDLMRKPH-----IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRL 236

  Fly   271 LDDTFTDKLSYFLRRFPFHLVQKEDAGTQ---MILASATMPTNTREILHKVIDVDTIREVVSPHL 332
            ||..|...|...|:..|          ||   ..|.|||| |:..:.|.:....:.::..|| :.
Yeast   237 LDMEFGPVLDRILKIIP----------TQERTTYLFSATM-TSKIDKLQRASLTNPVKCAVS-NK 289

  Fly   333 HRLMSHVTQKFLRLSKADRPATLLSLVKHDLAKRRPLIVFSNKSTTSDFVSIFLNNSGVNCLNLN 397
            ::.:..:.|..:.:....:...|:.|:...:.|  .:|:|:.....::.:|...|....:...|:
Yeast   290 YQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGK--TMIIFTRTKANAERLSGLCNLLEFSATALH 352

  Fly   398 GDMLMKIRLGRFEQFQNGHCDVLSTTDVGSRGLDTTRARHVVNFDFPLHVSDYIHRCGRIGRVGN 462
            ||:....|:|..:.|:.|...:|..|||.:||||......|||:|.|:....||||.||..|.|.
Yeast   353 GDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGR 417

  Fly   463 MDKALVTNLISSRREIDVVQRIEHAARTGGLLPDVNANIRNII----------NKRIVAEM 513
            ..|::  :|: |:.:::::.|||..  .|..||..:.: :|||          |..:|.||
Yeast   418 SGKSI--SLV-SQYDLELILRIEEV--LGKKLPKESVD-KNIILTLRDSVDKANGEVVMEM 472

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dbp21E2	NP_608544.1	DEADc_DDX28	119..345	CDD:350706	62/234 (26%)
		SF2_C_DEAD	339..462	CDD:350174	35/122 (29%)
RRP3	NP_011932.2	SrmB	82..489	CDD:440279	115/424 (27%)