DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp21E2 and MRH4

DIOPT Version :10

Sequence 1:NP_608544.1 Gene:Dbp21E2 / 33254 FlyBaseID:FBgn0086130 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_011451.1 Gene:MRH4 / 852816 SGDID:S000003032 Length:561 Species:Saccharomyces cerevisiae


Alignment Length:555 Identity:142/555 - (25%)
Similarity:235/555 - (42%) Gaps:142/555 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVLRVQSSRHVASYA---------TAAAAAVKT----KPPKAKSKGKK--QKGEPLISCRRSQFD 55
            |:|::    .|.|||         .:..|:|.|    |..|.|:||||  :|.:|     ...|:
Yeast    17 VLLKI----GVRSYAGGPRTKHKGNSPLASVPTGSSNKNRKQKAKGKKGNKKNDP-----DQAFN 72

  Fly    56 LTQYE--QTDAKFGSLSLASKGWLHNK-SKGDFFILNASVRG---EELQQEMQTVDEFLESTGMQ 114
            ..:|.  :.|.:   :::.|...|..| |..|..::...||.   |.:.:|...:.:..:.|...
Yeast    73 FGEYGGLKKDVE---MNMDSTNKLIQKISNFDQLLILPPVRDAVKEIISKESLKLQDSRKKTSEN 134

  Fly   115 IHPQLLENLRVELGIKLLTGIQKQGMPVVHGNEHCLIAAETGCGKTITYLLPIVDKLLQKEVVTE 179
            |.|..::.:.::...|.|...:.|    :|.     ||||||.|||:.||:|::|.|.::|:.|.
Yeast   135 IIPSPIQTVAIKRISKNLMDPKLQ----IHA-----IAAETGSGKTMAYLIPLIDYLKRQELETP 190

  Fly   180 ------RKLNTPRVLILTPGRELATQIAGVTEKLTQGTNLKVQSLLGGNT---------KQLMMN 229
                  ||....|.:||.|..||..|:        ..|..|.::|||.|:         :.|:.|
Yeast   191 ELWETLRKNVLIRSIILVPTHELVDQV--------YETVSKTKTLLGLNSFKWDKATSYRDLLEN 247

  Fly   230 PQFEEVDILVATLGAL-----SKLVTTGIYRMEQVRHLVLDEADTLLDDTFTDKLSYFLRRFP-- 287
            .: ..:||||.|.|.|     .:::|.....:.:|..:||||||||||.::.::....::|.|  
Yeast   248 IK-NRIDILVTTPGKLLNLFSIRMITRPDKVLSKVGFVVLDEADTLLDRSWLEETHSAIKRIPNI 311

  Fly   288 FHLVQKEDAGTQMILASATMPTNTREILHKVIDVDTIREVVSPHLHRLMSHVTQKFL-------R 345
            .||          |..|||:|....:.:.::.  .|:..:::|.||:|...:..|.:       :
Yeast   312 NHL----------IFCSATIPQEFNKTMQRLF--PTVVPIMTPRLHKLPFALDFKVINSALSPFK 364

  Fly   346 LSKADRPATLLSLVKHDLA----KRRPLIVFSNKSTTSDFVSIFLNNSGVNCLNLNGDMLMKIR- 405
            .||....|..|..:.:|..    ::|.:|..:.|....:.|::.....|.|.:.|.|:...:.| 
Yeast   365 GSKIKALAQTLYAISNDDTEPGFEKRCIIFVNEKKNVPEIVNLLNKKFGHNAIGLTGEDTFEERS 429

  Fly   406 --------------------------LGRFE---------QFQNGHCD----------VLSTTDV 425
                                      |.:||         :.:|.:.:          ||.|||:
Yeast   430 EKIMPFLSPPRPLSEVVAQSTSPPTSLKKFEIPDSNIVIGKLKNTNSNGTAPSNKSLHVLVTTDL 494

  Fly   426 GSRGLDTTRARHVVNFDFPLHVSDYIHRCGRIGRV 460
            .:|||:....|:||.:|.|....|.|||.||..|:
Yeast   495 MARGLNFKGVRNVVLYDVPKTSIDLIHRVGRTARM 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp21E2NP_608544.1 DEADc_DDX28 119..345 CDD:350706 71/254 (28%)
SF2_C_DEAD 339..462 CDD:350174 39/179 (22%)
MRH4NP_011451.1 DEADc_MRH4 100..346 CDD:350723 76/275 (28%)
SF2_C_DEAD 384..538 CDD:350174 33/146 (23%)

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