DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp21E2 and AT5G60990

DIOPT Version :10

Sequence 1:NP_608544.1 Gene:Dbp21E2 / 33254 FlyBaseID:FBgn0086130 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_568931.1 Gene:AT5G60990 / 836220 AraportID:AT5G60990 Length:456 Species:Arabidopsis thaliana


Alignment Length:449 Identity:119/449 - (26%)
Similarity:202/449 - (44%) Gaps:55/449 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 LQQEMQTVDEFLESTGMQIHPQLLENLRVELGIKLLTGIQKQGMPVVHGNEHCLIAAETGCGKTI 161
            :::|.:.|..|.|   :.:..:|::... .||.|..:.||.:.:|.....:..:..|:||.|||.
plant     1 MEEENEVVKTFAE---LGVREELVKACE-RLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTG 61

  Fly   162 TYLLPIVDKLLQKEVVTE-RKLNTPR----VLILTPGRELATQIAGVTEKLTQGTNLKVQSLLGG 221
            .:.:||:..||:....:| :|...|.    ..:|:|.||||.|||...|.|....:|:...|:||
plant    62 AFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGG 126

  Fly   222 NTKQLMMNPQFEEVDILVATLGAL-SKLVTTGIYRMEQVRHLVLDEADTLLDDTFTDKLSYFLRR 285
            ..:........:...::|||.|.| ..:..|..:.::.:::|||||||.||::.|...|:..|..
plant   127 IDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEE 191

  Fly   286 FPFHLVQKEDAGTQMILASATMPTNTR-------------EILHKVIDVDTIREVVSPHLHRLMS 337
            .|..        .:..|.||||....|             |...|...|||:::           
plant   192 IPLE--------RKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQ----------- 237

  Fly   338 HVTQKFLRLSKADRPATLLSLVKHDLAKRRPLIVFSNKSTTSDFVSIFLNNSGVNCLNLNGDMLM 402
              ..:|:.....|   ..|..:..::.:...:| |:.....:.|:::.|.:.|...:.::|.|..
plant   238 --QYRFVAAKYKD---CYLVYILSEMPESTSMI-FTRTCDGTRFLALVLRSLGFRAIPISGQMTQ 296

  Fly   403 KIRLGRFEQFQNGHCDVLSTTDVGSRGLDTTRARHVVNFDFPLHVSDYIHRCGRIGRVGNMDKAL 467
            ..|||...:|:.|.|::|..|||.|||||......|:|:|.|.:..|||||.||..|.|.....:
plant   297 SKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGI 361

  Fly   468 VTNLISSRREIDVVQRIEHAARTGGLLPDVNANIRNIIN--KRIVAEMKAAGMPVPALG 524
              :|: ::.|::...:||..  .|..||:..|....:::  :|:....|.:.|.:...|
plant   362 --SLV-NQYELEWYIQIEKL--IGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESG 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp21E2NP_608544.1 DEADc_DDX28 119..345 CDD:350706 66/244 (27%)
SF2_C_DEAD 339..462 CDD:350174 37/122 (30%)
AT5G60990NP_568931.1 SrmB 10..439 CDD:440279 117/440 (27%)

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