Protein Alignment Dbp21E2 and Rs1

DIOPT Version :10

• Sequence 1: NP_608544.1
• Gene: Dbp21E2 / 33254
• FlyBaseID: FBgn0086130
• Length: 536
• Species: Drosophila melanogaster
• Sequence 2: NP_651970.1
• Gene: Rs1 / 44087
• FlyBaseID: FBgn0021995
• Length: 782
• Species: Drosophila melanogaster
• Alignment Length: 576
• Identity: 150/576 - (26%)
• Similarity: 245/576 - (42%)
• Gaps: 118/576 - (20%)

  Fly     3 NLSVVLRVQSSRHVASYATAAAAAVKTKPPKAKSK--GKKQKGEPLISC-----RRSQFDLTQY- 59
            ||.::..::....|.:.:..:.|.|:.:|.|.:.|  .:.:||...:|.     :.:..||.:|
  Fly     6 NLDLIGTIEDDAEVENLSEDSDAEVEYQPTKLRHKKVTEFEKGFEFVSSVKEYNQDTWDDLMKYV 70

  Fly    60 ---------------------------EQTDA----------KFGSLSLASKGWLHNKSKGDFFI 87
                                       ||:|.          |..:|.|..|.....|.|
  Fly    71 KRKARTKTDDKIAARLQKRGGAEAVAAEQSDGSEIDLSEDELKHDNLRLREKKESKKKKK----- 130

  Fly    88 LNASVRGEELQQEMQTVDEFLEST-------GMQIHPQLLENLRVELGIKLLTGIQKQGMPV-VH 144
             .|....||.:.|.....:.:|:.       .|.:...|:..:.| ||....|.||...:|| :.
  Fly   131 -KAGEEDEEDEGEKMQFADTVEANEQITSFYQMNLSRPLMRAIGV-LGYIYPTPIQASTIPVALL 193

  Fly   145 GNEHCLIAAETGCGKTITYLLPIVDKLLQKEVVTERKLNT---PRVLILTPGRELATQIAGVTEK 206
            |.:.|..|| ||.|||..|:||.:::||.      |.||.   .|||:|.|.|||..|:..||::
  Fly   194 GRDICGCAA-TGTGKTAAYMLPTLERLLY------RPLNNKAITRVLVLVPTRELGAQVYQVTKQ 251

  Fly   207 LTQGTNLKVQSLLGG-----NTKQLMMNPQFEEVDILVATLGAL-SKLVTTGIYRMEQVRHLVLD 265
            |.|.|.:.|...:||     ....|..||     ||::||.|.| ..:..|..:.::.:..|:||
  Fly   252 LCQFTTIDVGLAIGGLDVKAQEAVLRQNP-----DIVIATPGRLIDHIKNTPSFTLDSIEVLILD 311

  Fly   266 EADTLLDDTFTDKLSYFLRRFPFHLVQKEDAGTQMILASATMPTNTREILHKVIDVDTIREVVSP 330
            |||.:||:.|.:::.        .::.......|.:|.||||....:::  ..:.:|...:|...
  Fly   312 EADRMLDEYFAEQMK--------EIINSCCKTRQTMLFSATMSEQVKDL--AAVSLDKPIKVFVN 366

  Fly   331 HLHRLMSHVTQKFLRL---SKADRPATLLSLV---KHDLAKRRPLIVFSNKSTTSDFVSIFLNNS 389
            :..::..::.|:|:|:   .:.||...|.||:   .||     ..:||......:..:.|.|...
  Fly   367 NNQQVAFNLRQEFIRIREDKEGDREPILASLICRTFHD-----HCMVFVQTKKQAHRLHILLGLL 426

  Fly   390 GVNCLNLNGDMLMKIRLGRFEQFQNGHCDVLSTTDVGSRGLDTTRARHVVNFDFPLHVSDYIHRC 454
            ||....|:|::..:.||...::|:....|||..|||.:||||....:.|:||..|:....||||.
  Fly   427 GVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRV 491

  Fly   455 GRIGRVGNMDKALVTNLISSRREIDVVQRIEHAARTGGLLPDVNANIRNIINKRIV 510
            ||..|.|   :|.::..::..:|..:|:             |:..|..:.|..||:
  Fly   492 GRTARAG---RAGISVSLAGEKERKIVK-------------DIIKNAESTIKNRII 531

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dbp21E2	NP_608544.1	DEADc_DDX28	119..345	CDD:350706	72/235 (31%)
		SF2_C_DEAD	339..462	CDD:350174	42/128 (33%)
Rs1	NP_651970.1	SrmB	156..576	CDD:440279	122/420 (29%)