DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp21E2 and abs

DIOPT Version :10

Sequence 1:NP_608544.1 Gene:Dbp21E2 / 33254 FlyBaseID:FBgn0086130 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_524220.1 Gene:abs / 40530 FlyBaseID:FBgn0015331 Length:619 Species:Drosophila melanogaster


Alignment Length:414 Identity:118/414 - (28%)
Similarity:192/414 - (46%) Gaps:45/414 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LNASVRGEELQQEMQTVDEFLESTGMQIHPQLLENLRVELGIKLLTGIQKQGMPVVHGNEHCLIA 152
            |...|.||.....:::..|      |:....:|..|..: |||..|.||.||:|.|......:..
  Fly   163 LRILVEGETPSPPIRSFRE------MKFPKGILNGLAAK-GIKNPTPIQVQGLPTVLAGRDLIGI 220

  Fly   153 AETGCGKTITYLLPIVDKLLQKEVVTERKLNT-PRVLILTPGRELATQIAGVTEKLTQGTNLKVQ 216
            |.||.|||:.::||::...|::|.....:.|. |..||:.|.||||.|    |.::.|..:..:|
  Fly   221 AFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQ----THEIIQHYSKHLQ 281

  Fly   217 S----------LLGGNTKQLMMNPQFEEVDILVATLGALSKLVTTGIYRMEQVRHLVLDEADTLL 271
            :          .:||......::.....|.|:|||.|.|..::...|..::..|:|.:||||.::
  Fly   282 ACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMI 346

  Fly   272 DDTFTDKLSYFLRRFPFHLVQKEDAGTQMILASATMPTN----TREILHKVIDVDTIREVVSPHL 332
            |..|.:.:...   |.|...|:     |.:|.|||||..    .|..|.|.:.::..|...:   
  Fly   347 DMGFEEDVRTI---FSFFKGQR-----QTLLFSATMPKKIQNFARSALVKPVTINVGRAGAA--- 400

  Fly   333 HRLMSHVTQKFLRLSKADRPATLLSLVKHDLAKRRPLIVFSNKSTTSDFVSIFLNNSGVNCLNLN 397
               ..:|||:...:.:..:...||..::....   |:::|:.|....|.:..:|...||..:.::
  Fly   401 ---SMNVTQQVEYVKQEAKVVYLLDCLQKTAP---PVLIFAEKKQDVDCIHEYLLLKGVEAVAIH 459

  Fly   398 GDMLMKIRLGRFEQFQNGHCDVLSTTDVGSRGLDTTRARHVVNFDFPLHVSDYIHRCGRIGRVGN 462
            |....:.|....:.::.|..|||..|||.|:|||....:||:|:|.|..:.:|:||.||.||  :
  Fly   460 GGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGR--S 522

  Fly   463 MDKALVTNLISSRREIDVVQRIEH 486
            ..|.|.|.||:...|..|:..::|
  Fly   523 NTKGLATTLINKTTEQSVLLDLKH 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp21E2NP_608544.1 DEADc_DDX28 119..345 CDD:350706 70/240 (29%)
SF2_C_DEAD 339..462 CDD:350174 37/122 (30%)
absNP_524220.1 DEADc_DDX41 188..393 CDD:350709 66/217 (30%)
SF2_C_DEAD 404..532 CDD:350174 40/132 (30%)

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