DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dbp21E2 and CG5800

DIOPT Version :10

Sequence 1:NP_608544.1 Gene:Dbp21E2 / 33254 FlyBaseID:FBgn0086130 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster


Alignment Length:537 Identity:133/537 - (24%)
Similarity:206/537 - (38%) Gaps:135/537 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KSKGKKQKGEPLISCRRSQF--------DL-TQYEQTDA----KFGSLSLASKGWLHNKSKGDFF 86
            :..|...:..|.....:|:.        || |:|.:.||    ||....|:.|            
  Fly    30 RKSGDNSQKRPRQEINKSRLAATEAEIQDLKTKYAEIDATAIKKFAQFPLSKK------------ 82

  Fly    87 ILNASVRGEELQQEMQTVDEFLESTGMQIHPQLLENLRVELGIKLLTGIQKQGM-PVVHGNEHCL 150
                       .|:.....:|       :||               |.:|:..: |.:.|.: .|
  Fly    83 -----------TQKALAESKF-------VHP---------------TQVQRDSIGPALQGKD-VL 113

  Fly   151 IAAETGCGKTITYLLPIVDKLLQKEVVTERKLNTPRVLILTPGRELATQIAGVTEKLTQGTNLKV 215
            .||.||.|||:.:|:|:::.|...:   ..:.:....:|::|.||||.||....:|:.:..:...
  Fly   114 GAAITGSGKTLAFLIPVLEHLFMNK---WSRTDGVGAIIISPTRELAYQIFETLKKVGKHHDFSA 175

  Fly   216 QSLLGGNTKQLMMNPQFE-----EVDILVATLG-ALSKLVTTGIYRMEQVRHLVLDEADTLLDDT 274
            ..::||.      |.:||     :.:||:.|.| .|..:....::....:..|||||||..||..
  Fly   176 GLIIGGK------NLKFERTRMDQCNILICTPGRLLQHMDENPLFNTSTMEMLVLDEADRCLDMG 234

  Fly   275 FTDKLSYFLRRFPFHLVQKEDAGTQMILASATMPTNTREILHKVIDVD---------TIREVVS- 329
            |...|:..:..||        ...|.:|.|||. |||.:.|.::...|         |.||..| 
  Fly   235 FQKTLNSIIENFP--------PVRQTLLFSATQ-TNTVQDLARLNLKDPVYVGYGGATPREEPSA 290

  Fly   330 -------------PHLHRLMSHVTQKFLRLSKADRPATLLSLVKHDLAKRRPLIVFSNKSTTSDF 381
                         |.|      :.|.::.|:..|:...|.|.:|:.|  ::.:|||......:.:
  Fly   291 STKKTPNTAVLAVPEL------LQQSYVVLNLEDKITMLWSFIKNHL--KQKIIVFVASCKQAKY 347

  Fly   382 V-SIFLN-NSGVNCLNLNGDMLMKIRLGRFEQFQNGHCDVLSTTDVGSRGLDTTRARHVVNFDFP 444
            : .||.. ..|...|.|.|.:....|:..:|.|......|:.:|||.|||||......||..|.|
  Fly   348 LYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCP 412

  Fly   445 LHVSDYIHRCGRIGRVGNMDKALVTNLISSRREIDVVQRIEHAARTGGLLPDVNANIR------- 502
            ..||.||||.||..|.....:.|:. |..|..|..:          ..|...:|.:||       
  Fly   413 EDVSQYIHRAGRSARNKTRGECLLV-LTPSEEEYMI----------SALKEQLNIDIRCVQIDPK 466

  Fly   503 NIINKRIVAEMKAAGMP 519
            .:.:.|:..|...|..|
  Fly   467 KLFSPRVKIEAFLAQFP 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp21E2NP_608544.1 DEADc_DDX28 119..345 CDD:350706 64/255 (25%)
SF2_C_DEAD 339..462 CDD:350174 41/124 (33%)
CG5800NP_573230.1 SrmB 71..493 CDD:440279 124/496 (25%)
DEADc_DDX10 83..279 CDD:350699 61/236 (26%)
DUF4217 474..530 CDD:464056 3/10 (30%)

Return to query results.
Submit another query.