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Protein Alignment Dbp21E2 and CG8611

DIOPT Version :10

Sequence 1:	NP_608544.1	Gene:	Dbp21E2 / 33254	FlyBaseID:	FBgn0086130	Length:	536	Species:	Drosophila melanogaster
Sequence 2:	NP_788922.1	Gene:	CG8611 / 32725	FlyBaseID:	FBgn0027602	Length:	975	Species:	Drosophila melanogaster

Alignment Length:	549	Identity:	135/549 - (24%)
Similarity:	227/549 - (41%)	Gaps:	124/549 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly    21 TAAAAAVKTKPPKAKSKGKKQKGEPLISCRRSQF-DLTQYEQTDAKFGSLSLASKGWLHNKSKGD 84
            ::|.:..:.|.||..:| |..|.|...|..|.:. .:..::|:|.:    :|...|
  Fly   262 SSAQSPGQEKEPKQTAK-KPPKAEETSSTNRFRTKKIGLFDQSDVE----ALKQLG--------- 312

  Fly    85 FFILNASVRGEELQQEMQTVDEFLESTGMQI-----HPQLLENLRVELGIKLLTGIQKQGMPVVH 144
                         |:.::.|.|.: .||.:|     ||..::||...|.|:.||.:|::.:|.|.
  Fly   313 -------------QRAVKPVKETI-FTGSKISTLGLHPHAVKNLEDLLSIRELTSVQQKTIPEVL 363

  Fly   145 GNEHCLIAAETGCGKTITYLLPIVDKLLQKEVVTERKLNTPRVLILTPGRELATQIAGVTEKLTQ 209
            ..:..|:.::||.|||:.|.||:|: ||||:....::.:....|::.|.|||..|...:.:||.:
  Fly   364 QGKDVLVRSQTGSGKTLAYALPLVE-LLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKLVK 427

  Fly   210 G-TNLKVQSLLGGNTKQLMMNPQFEEVDILVATLGAL-SKLVTTGIYRMEQVRHLVLDEADTLLD 272
            . |.:...|||||.:::.......:.::||:.|.|.| ..|:.|..:::.:::.|:|||||.||:
  Fly   428 PYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLE 492

  Fly   273 DTFTDKLSYFLRRFPFHLVQ-----------KEDAGTQMILASATMPTNTREI----LHKVIDVD 322
                  |.|  .|....||:           ||....|.:|.|||:.:..:::    |...:.:|
  Fly   493 ------LGY--ERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTLKNPLYID 549

  Fly   323 TIREVVSPHLHRLMSHVTQKFLRLSKAD-------------------------------RPATLL 356
            ...|..|..|.....:..:....|.:.|                               |...|.
  Fly   550 NSDEAASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVALS 614

  Fly   357 SLVKHDL---AKRRPLIVFSNKSTTSDFVSIFLNNS---------------------------GV 391
            ||:..::   .|:...|||.:.:...:|....||.:                           |:
  Fly   615 SLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEKGDSDDDGDIPLLQGL 679

  Fly   392 NCLNLNGDMLMKIRLGRFEQFQNGHCDVLSTTDVGSRGLDTTRARHVVNFDFPLHVSDYIHRCGR 456
            ....|:|.|....|.|.|..|::....||..|||..||:|....:.||.:..|...:|::||.||
  Fly   680 RFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVHRVGR 744

  Fly   457 IGRVGNMDKALVTNLISSRREIDVVQRIE 485
            ..|.|...:|:   |..:..|...|:.:|
  Fly   745 TARAGRKGRAV---LFLTPSEAQFVRHLE 770

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.