DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp21E2 and Prp5

DIOPT Version :10

Sequence 1:NP_608544.1 Gene:Dbp21E2 / 33254 FlyBaseID:FBgn0086130 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster


Alignment Length:562 Identity:145/562 - (25%)
Similarity:237/562 - (42%) Gaps:116/562 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PKAKSKG---------KK----QKGEPLISCRRSQFDLTQY----EQTDAKFGSLSLASKGWLHN 79
            |.|||:|         ||    :|||.:    ....|..:|    |..|.:..:::||.|   |.
  Fly   396 PPAKSQGVVILTGVAKKKTTTLKKGEVI----EQNMDSLEYSSEDELEDIRDTAVNLAMK---HR 453

  Fly    80 K--SKGDF-------FILNASVRGEELQQ----EMQTVDEFLESTGMQ----------------- 114
            |  :|.|.       |..|..|...||.:    :::.....||  |:|                 
  Fly   454 KELAKIDHSSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLE--GIQVKGKGCPKPIKTWAQCG 516

  Fly   115 IHPQLLENLRVELGIKLLTGIQKQGMPVVHGNEHCLIAAETGCGKTITYLLPIVDKLLQKEVVTE 179
            :..:.:|.|| .||.:..|.||.|.:|.:......:..|:||.|||:.::||:...:|.:..:.:
  Fly   517 VSKKEMEVLR-RLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMED 580

  Fly   180 RKLNTPRVLILTPGRELATQIAGVTEKLTQGTNLKVQSLLGGNTKQLMMNPQFEEV----DILVA 240
            .  :....:|:.|.|||..||.....|.::...|:...:.||..    ::.|..|:    :|:|.
  Fly   581 G--DGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTG----ISEQIAELKRGAEIIVC 639

  Fly   241 TLGALSKLVTTG---IYRMEQVRHLVLDEADTLLDDTFTDKLSYFLRRFPFHLVQKEDAGTQMIL 302
            |.|.:..::...   :..:.:|.::||||||.:.|..|..::        ..::.......|.::
  Fly   640 TPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQV--------MRIIDNVRPDRQTVM 696

  Fly   303 ASATMPTN----TREILHKVIDVDT-IREVVSPHL--HRLMSHVTQKFLRLSKADRPATLLSLVK 360
            .|||.|..    .|.||.|.|:|.. .|.||...:  |.::.:...||.:|.:      ||.:.:
  Fly   697 FSATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLE------LLGIYQ 755

  Fly   361 HDLAKRRPLIVFSNKSTTSDFVSIFLNNSGVNCLNLNGDMLMKIRLGRFEQFQNGHCDVLSTTDV 425
                :...:|||.:|...:|.:...|..:...|::|:|.:....|......|::|...:|..|.|
  Fly   756 ----EAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSV 816

  Fly   426 GSRGLDTTRARHVVNFDFPLHVSDYIHRCGRIGRVGNMDKA--LVTNLISSRREIDVVQRIEHAA 488
            .:||||......|||:|.|.|..||:|||||.||.|....|  .:|. ..||...|:::.::   
  Fly   817 AARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITP-EQSRYAGDIIRAMD--- 877

  Fly   489 RTGGLLPDVNANIRNIINKRIVAEMKAAGMPVPALGSLNGHT 530
            .:|.|:|               ||::|......||....|.|
  Fly   878 LSGTLIP---------------AELQALWTEYKALQEAEGKT 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp21E2NP_608544.1 DEADc_DDX28 119..345 CDD:350706 62/239 (26%)
SF2_C_DEAD 339..462 CDD:350174 39/122 (32%)
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653
DEAD-like_helicase_N 454..899 CDD:475120 125/490 (26%)
KH-I_DDX46 1121..1223 CDD:411901
Blue background indicates that the domain is not in the aligned region.

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