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Protein Alignment Pkg21D and Prkaca

DIOPT Version :9

Sequence 1:	NP_477213.1	Gene:	Pkg21D / 33253	FlyBaseID:	FBgn0000442	Length:	768	Species:	Drosophila melanogaster
Sequence 2:	NP_001094392.1	Gene:	Prkaca / 25636	RGDID:	3389	Length:	351	Species:	Rattus norvegicus

Alignment Length:	336	Identity:	134/336 - (39%)
Similarity:	202/336 - (60%)	Gaps:	15/336 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly   418 EKDYGDESRKLAMKQAQESCR---DEPKEQLQQEFPDLKLTDLEVVSTLGIGGFGRVELVKAHHQ 479
            :|....||.|..:.:|:|...   :.|.:...|      |...:.:.|||.|.||||.|||  |:
  Rat     8 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQ------LDHFDRIKTLGTGSFGRVMLVK--HK 64

  Fly   480 DRVDIFALKCLKKRHIVDTKQEEHIFSERHIMLSSRSPFICRLYRTFRDEKYVYMLLEACMGGEI 544
            :..:.:|:|.|.|:.:|..||.||..:|:.|:.:...||:.:|..:|:|...:||::|...|||:
  Rat    65 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM 129

  Fly   545 WTMLRDRGSFEDNAAQFIIGCVLQAFEYLHARGIIYRDLKPENLMLDERGYVKIVDFGFAKQIGT 609
            ::.||..|.|.:..|:|....::..|||||:..:||||||||||::|::||:::.||||||::
  Rat   130 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-- 192

  Fly   610 SSKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIHELLNGTPPFSAPDPMQTYNLILKGIDM 674
            ..:|||.||||||:||||||:||:::|||:||||:||:|:..|.|||.|..|:|.|..|:.|  .
  Rat   193 KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG--K 255

  Fly   675 IAFPKHISRWAVQLIKRLCRDVPSERLGYQTGGIQDIKKHKWFLGFDWDGLASQLLIPPFVRPIA 739
            :.||.|.|.....|::.|.:...::|.|....|:.|||.||||...||..:..:.:..||:....
  Rat   256 VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK 320

  Fly   740 HPTDVRYFDRF 750
            .|.|...||.:
  Rat   321 GPGDTSNFDDY 331

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.