DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3544 and lsrK

DIOPT Version :10

Sequence 1:NP_608543.1 Gene:CG3544 / 33252 FlyBaseID:FBgn0031279 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_416028.3 Gene:lsrK / 946069 ECOCYCID:G6798 Length:530 Species:Escherichia coli


Alignment Length:562 Identity:116/562 - (20%)
Similarity:189/562 - (33%) Gaps:157/562 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LGLHLGTQLFRALILDSKLNVTYVAQIRYD----VDLPEFKTTNGILSDGGPGEFLANPVMWVKA 75
            :.|..||...||:|.|.:.|...|.|..:.    .|:|            |..||..|. .|..|
E. coli    15 MALDAGTGSIRAVIFDLEGNQIAVGQAEWRHLAVPDVP------------GSMEFDLNK-NWQLA 66

  Fly    76 LDMLMDCLVKQGADMHTVVSIAGAAQQHGCVFWSELGLRRLCNLNVNLRLHEQITE------SAF 134
            .:.:...|...|.....:.:::..:.:.|.|.::..|.......||:.|...:::|      :.|
E. coli    67 CECMRQALHNAGIAPEYIAAVSACSMREGIVLYNNEGAPIWACANVDARAAREVSELKELHNNTF 131

  Fly   135 ELTRTPTWRDSSTDVQVREMEHTVGGPAELSKITGSRAYTRFTGPQIRKVYTQCPEQYERTSRIS 199
            |                .|:....|....||.|           |::..:.....:.|.:.|.|:
E. coli   132 E----------------NEVYRATGQTLALSAI-----------PRLLWLAHHRSDIYRQASTIT 169

  Fly   200 LISSFLASLLIGGIASIDYSDGSGMNLLDIRKKKWSAACLDACAPDLARRLMKPIPSSRLQGRIG 264
            :||.:||.:|.|.:| :|.|:.....|||:..:.|..|.||...  |...::.|:..:.      
E. coli   170 MISDWLAYMLSGELA-VDPSNAGTTGLLDLTTRDWKPALLDMAG--LRADILSPVKETG------ 225

  Fly   265 DYYVKRWNFRPDCMVVASTGSKASELAGLLVENDFLMLSLDTSDV--------VVMPLKKA---- 317
                         .::....|:|:||.||......:   :...||        ||.|.:.|    
E. coli   226 -------------TLLGVVSSQAAELCGLKAGTPVV---VGGGDVQLGCLGLGVVRPAQTAVLGG 274

  Fly   318 ---------------PRLE---DGHVMCHPTRRDE---YMGL--------LCFQNGGLTRKAICE 353
                           |.:.   :.||:....:.:.   :.||        .|.:     .|.|.|
E. coli   275 TFWQQVVNLAAPVTDPEMNVRVNPHVIPGMVQAESISFFTGLTMRWFRDAFCAE-----EKLIAE 334

  Fly   354 DVAGGSWRHFYEMLDATPSGNNGNVAVHFRDREIIPTAKGTLRWDAHISPMSAECIRGLHRFSTP 418
            .:...::....||....|.|:.|.:.: |.||....|      | .|.:|          .|...
E. coli   335 RLGIDTYTLLEEMASRVPPGSWGVMPI-FSDRMRFKT------W-YHAAP----------SFINL 381

  Fly   419 EIE---------VRALIE-GQIMHHWSIAHEMGFHHTPNTKIIVVGEDSRCQSVLQIVADIFNAP 473
            .|:         .|||.| ..|:...::.....|.:...:.::..|..|:.:...||:||:...|
E. coli   382 SIDPDKCNKATLFRALEENAAIVSACNLQQIADFSNIHPSSLVFAGGGSKGKLWSQILADVSGLP 446

  Fly   474 VYQRTGVEVSLLGCAFRARYAFYEHRESACNCHSCMMPTGRR 515
            |......|.:.||||..|..        .....|.|..||.|
E. coli   447 VNIPVVKEATALGCAIAAGV--------GAGIFSSMAETGER 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3544NP_608543.1 ASKHA_NBD_FGGY_SpXK-like 14..551 CDD:466795 116/562 (21%)
lsrKNP_416028.3 PRK10939 10..530 CDD:182853 116/562 (21%)

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