DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr21a and lite-1

DIOPT Version :9

Sequence 1:NP_001259841.1 Gene:Gr21a / 33251 FlyBaseID:FBgn0041250 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_509043.3 Gene:lite-1 / 180894 WormBaseID:WBGene00001803 Length:439 Species:Caenorhabditis elegans


Alignment Length:425 Identity:82/425 - (19%)
Similarity:141/425 - (33%) Gaps:120/425 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 SKQVMWAI---FIYSCQTTIVVLVLRERVKKFVTSPDKRFDEAIYN-VIFISLLFTNFLLPVASW 167
            |.:..|||   .:|.....:::|.|.:.::     |:......||: ::|..||||..       
 Worm    36 SSRNKWAICDRTLYPIYYLLLILGLNQSIR-----PNNSLLFRIYSWLVFCLLLFTTL------- 88

  Fly   168 RHGPQVAIFKNMWTNYQYKFFKTTGSPIVFPN-------------LYPL---------------- 203
            |...||.:..|.......:||....|.|...|             ||.|                
 Worm    89 RKFNQVGVRPNGTRENLQEFFANPRSMITLCNALIMLSGLLASLQLYTLGAKRLKPLKILCQFSL 153

  Fly   204 --------------TWSLCVFSWLLSI------AINLSQYFL----QPDFR-------LWYTFAY 237
                          ...|.|||.||::      |::...|.|    .|:..       |..::|.
 Worm   154 NVRTKQAERRQFMINTFLAVFSGLLALTMAATYAMSKWGYILYIVGTPNLDTETIFCVLLDSYAL 218

  Fly   238 YPIIAMLNCFCSLWYINCNAFGTASRALSDALQTTIRGEKP-----AQKLTEYRHLWVDLSHMMQ 297
            :...|.::....|:|.:|:....:.:.|.:.:....:.|.|     .||:.:     ..:|:...
 Worm   219 FVSRAAISALAILFYQHCSVIRRSIKHLINEMVPAEQDECPLPESSLQKIHD-----CQISYQRI 278

  Fly   298 QLGRAYSNMYGMYCLVIFFTTIIATYGSISEII---------DHGATYKEVGLFVI-------VF 346
            ..|:|....|  |..|:|:     :||....|.         .....:.||...||       |.
 Worm   279 FNGKAVIEEY--YSFVLFY-----SYGVCIPIFCFLMFVGMSAQSICWSEVVSIVIWIVNAILVL 336

  Fly   347 YCMGLLYIICNEAHYASRKVGLDF----QTKLLNINLTAVDAATQKEVEMLLVAINKNPPIMNLD 407
            ....|...:.||.  ..|.|...|    :|.....:||.:...|     .....|:.....::..
 Worm   337 LLFSLPAFMINED--GDRLVASSFRMYHETFHEERDLTVLSQMT-----FFTFQIHSTKLTLSAC 394

  Fly   408 GYANINRELITTNISFMATYLVVLLQFKITEQRRI 442
            .|..::|.::.:..|.:.||.::|.:|.|...:.:
 Worm   395 NYFYMDRSILLSLFSAILTYFLILWEFDIKNNQSL 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr21aNP_001259841.1 7tm_7 75..438 CDD:285581 82/419 (20%)
lite-1NP_509043.3 7tm_7 75..425 CDD:285581 73/375 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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