DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr21a and Gr59b

DIOPT Version :9

Sequence 1:NP_001259841.1 Gene:Gr21a / 33251 FlyBaseID:FBgn0041250 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_523818.2 Gene:Gr59b / 117484 FlyBaseID:FBgn0045482 Length:366 Species:Drosophila melanogaster


Alignment Length:442 Identity:80/442 - (18%)
Similarity:150/442 - (33%) Gaps:128/442 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 MEEVYVRKQETVDDPLELDKHDSFYQT----TKSLLVLFQIMGVMPIHRNPPEKNLPRTGYSWGS 107
            |.::|.|....:....:...:..|:.|    |.:|:.....:.::||                  
  Fly     5 MIKLYFRYSLAIGITSQQFSNRKFFSTLFSRTYALIANIVTLIMLPI------------------ 51

  Fly   108 KQVMWAI-FIYSCQTTIVVLVL-RERVKKFVTSPDKRFDEAIYNVIFISLLFTNFLLPVASWRHG 170
              |||.: .::..:.|...|:| ...|::.|:              |:.:|:|     |.|  .|
  Fly    52 --VMWQVQLVFQQKKTFPKLILITNNVREAVS--------------FLVILYT-----VLS--RG 93

  Fly   171 PQVAIFKNMWTNYQYKF-------FKTTGSP------IVFPNLYPLTWSLCV-------FSWLLS 215
            .:...||.|.......|       ||..|..      ::|...:.|:| |||       :|....
  Fly    94 FRDTAFKEMQPLLLTLFREEKRCGFKGIGGVRRSLRILLFVKFFTLSW-LCVTDVLFLLYSTDAL 157

  Fly   216 IAINLSQYFLQPDFRLWYTFAYYPIIAM--LNCFCSLWYINCNAFGTASRALSDALQTTIRGEKP 278
            |.:|:.::|.:.:..        .|:.|  :..|.:||:| ...|...:|.|...:::     |.
  Fly   158 IWVNVLRFFFKCNTN--------NILEMVPMGYFLALWHI-ARGFDCVNRRLDQIVKS-----KS 208

  Fly   279 AQKLTEYRHLW------------VDLSHMMQQLGRAYSNMYGMYCLVIFFTTIIATYGSISEIID 331
            .:|..|.:|||            ::..:..|.|...:.|         |...:|..|.......|
  Fly   209 TRKHRELQHLWLLHACLTKTALNINKIYAPQMLASRFDN---------FVNGVIQAYWGAVFTFD 264

  Fly   332 HGATYKEVGLFVIVFYCMGLLYIICNEAHYASRKVGLDFQTKLLNINLTAVDAATQ--------K 388
            ....:               .:::.....|..|.:.......:.::.:...|:|..        |
  Fly   265 LSTPF---------------FWVVYGSVQYHVRCLDYYLIDNMCDVAVEYHDSAKHSWSEVRWTK 314

  Fly   389 EVEMLLVAINKNPPIMNLDGYANINRELITTNISFMATYLVVLLQFKITEQR 440
            |:...::..|.....:...|....||.:....||.:..|::|||||.:..::
  Fly   315 EISSYVIYANSTKLQLWSCGLFQANRSMWFAMISSVLYYILVLLQFHLVMRK 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr21aNP_001259841.1 7tm_7 75..438 CDD:285581 74/406 (18%)
Gr59bNP_523818.2 7tm_7 6..364 CDD:285581 79/437 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.