DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr21a and Gr93c

DIOPT Version :9

Sequence 1:NP_001259841.1 Gene:Gr21a / 33251 FlyBaseID:FBgn0041250 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_732665.1 Gene:Gr93c / 117471 FlyBaseID:FBgn0045469 Length:397 Species:Drosophila melanogaster


Alignment Length:256 Identity:60/256 - (23%)
Similarity:109/256 - (42%) Gaps:38/256 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 LYPLTWSLCVFSWLLSIAINLSQYFLQPDFRLWYTFAYYPIIAMLNCFCSLWYINCNAFGTAS-R 263
            |:.|..||.:|:.|..|.:.:....:     :...|..|..:|.|       |...|:|.... |
  Fly   164 LWHLPDSLSLFATLCEIFLEIGSLMI-----IHIGFVGYLSVAAL-------YSEVNSFARIELR 216

  Fly   264 ALSDALQTTIRGE--KPAQKLTEYRHLWVD----LSHMMQQLGRAYSNMYGMYCLVIFFTTIIAT 322
            ....:|:..:.|.  :...::.|||   ||    :...::::||.:..:..:..|:|....|.||
  Fly   217 RQLRSLERPVGGPVGRKQLRIVEYR---VDECISVYDEIERVGRTFHRLLELPVLIILLGKIFAT 278

  Fly   323 YGSISEIIDHGATY-KEVGLFVIV---FYCMGLLYIICNEAHYASRKVGLDFQTKLLNINLTAVD 383
            .....|:|.....| :::|::.:|   |..:.||.:..:||..:||.:.   :..|.|..:|. .
  Fly   279 TILSYEVIIRPELYARKIGMWGLVVKSFADVILLTLAVHEAVSSSRMMR---RLSLENFPITD-H 339

  Fly   384 AATQKEVEMLLVAIN----KNPPIMNLDGYANINRELITTNISFMATYLVVLLQFKITEQR 440
            .|...:.||.|..:|    :..|:    |...::.|:|...:|.|.||...::|:.|...|
  Fly   340 KAWHMKWEMFLSRLNFFEFRVRPL----GLFEVSNEVILLFLSSMITYFTYVVQYGIQTNR 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr21aNP_001259841.1 7tm_7 75..438 CDD:285581 59/252 (23%)
Gr93cNP_732665.1 7tm_7 18..393 CDD:285581 58/251 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.