DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABA-B-R3 and gpr158b

DIOPT Version :9

Sequence 1:NP_001245826.1 Gene:GABA-B-R3 / 33248 FlyBaseID:FBgn0031275 Length:1305 Species:Drosophila melanogaster
Sequence 2:XP_697068.4 Gene:gpr158b / 568637 ZFINID:ZDB-GENE-130530-875 Length:1286 Species:Danio rerio


Alignment Length:1127 Identity:235/1127 - (20%)
Similarity:375/1127 - (33%) Gaps:363/1127 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 ACSNHELQLAVENLIVVSTH--NSIVGNNVS-----------YSGLNNHMF--NSQLRKQSAQFH 445
            |.|:..|| .|.:.:..:|:  |.::.:|.|           |..|.:.|.  |.::.:....||
Zfish   119 AASHSSLQ-GVLDTVAQATNFLNMLLQSNTSKEQHLRMDIQWYHALVSSMLEGNPKIHRAVVTFH 182

  Fly   446 GQDGFGSGYGSRISIAATQSDSRRRRRRGVGGTSGGHLFPEAISQYAPQTYDAVWAIALALRAAE 510
            .:.  ....|.::.:.||:.:.|              :..:.:|..|..        .|..|.:|
Zfish   183 MES--PEAPGPQVFLQATRGEER--------------IVLQDLSTTARH--------RLKNRTSE 223

  Fly   511 EHW----RRNEEQSKL----------DGFDYTRSDMAWE--FLQ-QMGKL--------------- 543
            ..|    |...:..:|          .|:...:|.:.|.  :|: :.|:.               
Zfish   224 SDWYNVFRDRNKHKRLVKSRAFPAAHGGYFLDKSHVKWSSPYLECEHGRFVPHWLLTISAGFYGL 288

  Fly   544 ------HFLGV---------------SGPVSFSGPDRVGTTAF----------------YQIQRG 571
                  .|.||               |....|:|..|...|:.                .|.:||
Zfish   289 KNKTAPEFRGVVRVDVNLQDVDIDQCSNSGWFAGTHRCNLTSMECNPIVGHGFVLDKYKCQCKRG 353

  Fly   572 LLEP--VALY-YPATD---------ALDFRCPRCRP-VKWHSGQVP-IAKRVFKLRVATIAPLAF 622
            ...|  |||. :..||         .|..||..||. .::.....| :|.....||:|.:     
Zfish   354 FYHPSRVALNGFSKTDLGTYTDESWELSGRCLPCREGCEFCRDDTPCLAHEDTALRLAMV----- 413

  Fly   623 YTIATLSSVGIALAIAFLAFNL--HFRKLKAIKLSSPKLSNITAVGCIFVYATVILLGLDHSTLP 685
                  |..|..:.:.|::..:  |||..|.||.|...|......|.:.:|..|::..|:.|.  
Zfish   414 ------SFQGFCMLLDFISMVVVYHFRHNKRIKASGLILLEAILSGSVLLYFPVMIQYLNPSV-- 470

  Fly   686 SAEDSFATVCTARVYLLSAGFSLAFGSMFAKTYRVHRIF-TRTGSVFKDKMLQDIQLILLVGGLL 749
                 |..:....|.||  ||::.:|::..|.|||.::| :||..  :...:...:::.|:..:|
Zfish   471 -----FRCILLRWVRLL--GFAIVYGTVILKLYRVLKVFLSRTAQ--RIPYMTSWRVLRLLAVIL 526

  Fly   750 LVDALLVTLWVVTDPMERHLHNLTLEISATDRSVVYQPQVEVCRSQHTQTWLSVLYAYKGLLLVV 814
            ||....:..|........:..:..::|..|...:    |..:|.   ..:|..::.|.:.|.|:.
Zfish   527 LVVMWFLAAWTSAVCQNHNTRHALIDIGVTPEGL----QFSMCL---LDSWDYMMAAAEFLFLLW 584

  Fly   815 GVYMAWETRHVKIPALNDSQYIGVSVYSVVITSAIVVVL-----ANLISERVTLAFITITALILT 874
            |||:.:..|.|. .|.::.:|:.|::|:.::.|||..::     ..|..:.:.:.|...|.|   
Zfish   585 GVYLCYAVRTVP-SAFHEPRYLAVAIYNELLISAIFHIIRFSLGTGLHPDWMLMLFFVHTHL--- 645

  Fly   875 STTATLCLLFIPKL-----HDIWARNDIIDPVIH---SMGLKMEC---------NTRRFVVDDRR 922
            :.|.||.||.|||.     |   ||.||......   .||....|         :......:|.|
Zfish   646 TVTVTLGLLLIPKFLFTGTH---AREDIATEAYEDELDMGHSGSCLNSSITSAWSEHSLDPEDIR 707

  Fly   923 ELQYRVEVQNRVYKKE--------IQALDAEIRKLERLLESGLTTTSTTTSSSTSL--LTGGGHL 977
            |...::..|..:||::        :|...:..|.|.|.|...:|....|.|...|.  ..|..|.
Zfish   708 EELKKLYSQLEIYKRKKMLANNPHLQKKRSSKRGLGRTLMRRITEIPETVSRQYSREDRDGSDHG 772

  Fly   978 KPELTVTSGISQTPAASKNRTPSISGILPNLLLSVLPPVIPRASWPSAEYMQ--------IP--- 1031
            ....|:.........:.|:|..|:...:.:|..|           .|.::..        :|   
Zfish   773 SNRSTLRRNPFDPSHSGKSREESLKSKMFSLKRS-----------HSYDHTHDQGGQTNGVPGDK 826

  Fly  1032 MRRSVTFAS----------------QPQLEEA---------CLPAQDLINLRLAHQQATEAK--- 1068
            |..|.|.||                .|::|.|         |..|.       ||..|.|.|   
Zfish   827 MENSTTEASLLDTLMGRRSNKKNPEVPKVELAESTESVPLVCKSAS-------AHNLAAEKKPVH 884

  Fly  1069 --TGLINRLRGIFS---RTTSSNKGSTASL--ADQKGLKA------------------------- 1101
              |.::.:...:.:   ..|....|.|.|:  |::|||||                         
Zfish   885 LRTSMLQKSLSVIASAREKTLGIAGKTHSVEDANKKGLKAREGTALSEVDESPECLPKMIISQSV 949

  Fly  1102 ---AFKSHMGLFTRLIPSSQTASCNAIYNNPNQDS-----------------IPSEASSHPN--- 1143
               ...|.||:..:.:..||.:.|    :.|.:..                 .|||..|..:   
Zfish   950 EYTKTPSKMGIMKQQVSGSQPSIC----SEPGKSKELYDLSEVCPWEVEDLPTPSEGKSQKHVSI 1010

  Fly  1144 -GNHLKPIHRGSLTKSGTHLDHLTKDPNFLPIPTISGGEQGDQTLGGKYVKLLETKVNFQLPSNR 1207
             .|....|| ||..|||....|..|.                  ||             |.||||
Zfish  1011 APNETTTIH-GSSAKSGHKSQHKQKG------------------LG-------------QSPSNR 1043

  Fly  1208 RPSVVQQPPSLRERV--RGSPRFPHRILPPTCSLSALA-ESEDRPGDSTSILGSCKSIPRISLQQ 1269
            |.|        |::.  |...|.|...|..|....|.| ..||....:....|  .|..|||.::
Zfish  1044 RRS--------RDKTGERDEGRKPKSPLNLTTHKDASAWNFEDSSLQAMDTAG--LSPERISRKK 1098

  Fly  1270 ATSGGTWKSMETAGKSRLSLGD 1291
            :.:       .|.||.::.|.|
Zfish  1099 SVT-------PTDGKPKIFLSD 1113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABA-B-R3NP_001245826.1 PBP1_GABAb_receptor 157..590 CDD:107361 50/289 (17%)
ANF_receptor 174..568 CDD:279440 40/255 (16%)
7tm_3 633..889 CDD:278433 65/268 (24%)
gpr158bXP_697068.4 7tm_3 420..659 CDD:278433 64/260 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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