Sequence 1: | NP_001245826.1 | Gene: | GABA-B-R3 / 33248 | FlyBaseID: | FBgn0031275 | Length: | 1305 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001016007.2 | Gene: | gabbr2 / 548761 | XenbaseID: | XB-GENE-5815161 | Length: | 962 | Species: | Xenopus tropicalis |
Alignment Length: | 981 | Identity: | 292/981 - (29%) |
---|---|---|---|
Similarity: | 460/981 - (46%) | Gaps: | 166/981 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 60 SSPSSSPPGESASTVTAGG----TPIPPRSDWKYKRTKVKRRQQRLNSHSNLPGSTNASHAHHLL 120
Fly 121 NLPPRQRYLKVNQ------VFESERRMSPAEMQRNHGKIVLLGLFELSTSRGPRPDGLSELGAAT 179
Fly 180 MAVEHINRKRLLPGYTLELVTNDTQCDPGVGVDRFFHAIYTQPSTRMVMLLGSACSEVTESLAKV 244
Fly 245 VPYWNIVQVSFGSTSPALSDRREFPYFYRTVAPDSSHNPARIAFIRKFGWGTVTTFSQNEEVHSL 309
Fly 310 AVNNLVTELEAANISCAATITFAATDFKEQLLLLRETDTRIIIGSFSQELAPQILCEAYRLRMFG 374
Fly 375 ADYAWILHESMGAPWWPDQRTA-CSNHELQLAVENLIVVSTHNSIVGNNVSYSGLNNHMFNSQLR 438
Fly 439 KQSA-----QFHGQDGFGSGYGSRISIAATQSDSRRRRRRGVGGTSGGHLFPEAISQYAPQTYDA 498
Fly 499 VWAIALALRAAEEHWRRNEEQSKLDGFDYTRSDMAWEFLQQMGKLHFLGVSGPVSFSGPDRVGTT 563
Fly 564 AFYQIQRGLLEPVALYYPATDALDFRCPRCRPVKWHSGQVPIAKRVFKLRVATIAPLAFYTI-AT 627
Fly 628 LSSVGIALAIAFLAFNLHFRKLKAIKLSSPKLSNITAVGCIFVYATVILLGLDHSTLPSAEDSFA 692
Fly 693 TVCTARVYLLSAGFSLAFGSMFAKTYRVHRIFTRTGSVFKDKMLQDIQLILLVGGLLLVDALLVT 757
Fly 758 LWVVTDPMERHLHNLTLEISATDRSVVYQPQVEVCRSQHTQTWLSVLYAYKGLLLVVGVYMAWET 822
Fly 823 RHVKIPALNDSQYIGVSVYSVVITSAIVVVLANLISERVTLAFITITALILTSTTATLCLLFIPK 887
Fly 888 LHDIWARNDIIDPVIHSMGLKMECNTRRFVVDDRRELQYRVEVQNRVYKKEIQALDAEIRKLERL 952
Fly 953 LESGLTTTSTTT--SSSTSLLTG----GGHLKPELT--------VTSGISQTPAAS----KNRTP 999
Fly 1000 SISGIL 1005 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GABA-B-R3 | NP_001245826.1 | PBP1_GABAb_receptor | 157..590 | CDD:107361 | 131/438 (30%) |
ANF_receptor | 174..568 | CDD:279440 | 120/399 (30%) | ||
7tm_3 | 633..889 | CDD:278433 | 105/255 (41%) | ||
gabbr2 | NP_001016007.2 | PBP1_GABAb_receptor | 83..481 | CDD:380589 | 132/451 (29%) |
7tmC_GABA-B-R2 | 501..770 | CDD:320421 | 111/292 (38%) | ||
TM helix 1 | 501..526 | CDD:320421 | 10/24 (42%) | ||
TM helix 2 | 538..559 | CDD:320421 | 6/20 (30%) | ||
TM helix 3 | 575..599 | CDD:320421 | 12/23 (52%) | ||
TM helix 4 | 618..638 | CDD:320421 | 8/19 (42%) | ||
TM helix 5 | 674..700 | CDD:320421 | 13/25 (52%) | ||
TM helix 6 | 709..732 | CDD:320421 | 11/22 (50%) | ||
TM helix 7 | 739..764 | CDD:320421 | 8/24 (33%) | ||
GBR2_CC | 800..838 | CDD:375881 | 9/37 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D267884at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005571 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |