DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABA-B-R3 and mGluR

DIOPT Version :9

Sequence 1:NP_001245826.1 Gene:GABA-B-R3 / 33248 FlyBaseID:FBgn0031275 Length:1305 Species:Drosophila melanogaster
Sequence 2:NP_001259076.1 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster


Alignment Length:1010 Identity:212/1010 - (20%)
Similarity:359/1010 - (35%) Gaps:315/1010 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 GKIVLLGLFEL-----STSRGPR--PDGLSELGAATMAVEHINR-KRLLPGYT-----LELVTND 202
            |.|:|.|||.:     ....||:  ..|:..|.|...|::.:|. ..:|||.|     |:..:.|
  Fly    43 GDIILGGLFPVHEKGEGAPCGPKVYNRGVQRLEAMLYAIDRVNNDPNILPGITIGVHILDTCSRD 107

  Fly   203 T----------------------QCDPGVGVDRFFHAIYTQPSTR-------MVMLLGSACSEVT 238
            |                      :|..|           :.|..|       :..::|.:.|.|:
  Fly   108 TYALNQSLQFVRASLNNLDTSGYECADG-----------SSPQLRKNASSGPVFGVIGGSYSSVS 161

  Fly   239 ESLAKVVPYWNIVQVSFGSTSPALSDRREFPYFYRTVAPDSSHNPARIAFIRKFGWGTVTTFSQN 303
            ..:|.::..::|.|||..||:..|||:..|..|.|||.||:..:.|.:..::.|.|..|:|....
  Fly   162 LQVANLLRLFHIPQVSPASTAKTLSDKTRFDLFARTVPPDTFQSVALVDILKNFNWSYVSTIHSE 226

  Fly   304 EEVHSLAVNNLVTELEAAN--ISCAATITFAATD--FKEQL-LLLRETDTRIIIGSFSQELAPQI 363
            .......:..|..|....|  |:.|..:..||.|  |...: .|.::.:.|.::.....|.|.:|
  Fly   227 GSYGEYGIEALHKEATERNVCIAVAEKVPSAADDKVFDSIISKLQKKPNARGVVLFTRAEDARRI 291

  Fly   364 LCEAYRLRMFGADYAWILHESMGAPWWPDQRTACSNHELQLAVENLIVVSTHNSIVGN------- 421
            |..|.|..: ...:.||..:.    |...|:..   ..|:...|..|.|...:.|:.:       
  Fly   292 LQAAKRANL-SQPFHWIASDG----WGKQQKLL---EGLEDIAEGAITVELQSEIIADFDRYMMQ 348

  Fly   422 --------NVSYSGLNNHMFNSQLRKQSAQFHGQDGFGSGYGSRISI-AATQSDSRRRRRRGVGG 477
                    |..::......||..|...|.:....:...| ..::|.: |.|:.|...|....||.
  Fly   349 LTPETNQRNPWFAEYWEDTFNCVLTSLSVKPDTSNSANS-TDNKIGVKAKTECDDSYRLSEKVGY 412

  Fly   478 TSGGHLFPEAISQYAPQTYDAVWAIALALR---------------------AAEEHWRR-----N 516
            ..      |:.:|:   ..|||:|.|.||.                     .:|..|.|     .
  Fly   413 EQ------ESKTQF---VVDAVYAFAYALHNLHNDRCNTQSDQTTETRKHLQSESVWYRKISTDT 468

  Fly   517 EEQSKLDGFDYTRSDMAWEFLQQMGKLHFLGVSG-PVSFSGPDRVG---------------TTAF 565
            :.|:..|..:|...:....:|..:.   |:.::| .|.|   ||.|               .::.
  Fly   469 KSQACPDMANYDGKEFYNNYLLNVS---FIDLAGSEVKF---DRQGDGLARYDILNYQRQENSSG 527

  Fly   566 YQIQ------RGLL-------------EPV-ALYYPATDAL------------------------ 586
            ||.:      .||.             :|. |...|....:                        
  Fly   528 YQYKVIGKWFNGLQLNSETVVWNKETEQPTSACSLPCEVGMIKKQQGDTCCWICDSCESFEYVYD 592

  Fly   587 DFRCPRCRP------------------VKWHS--GQVPIAKRVFKLRVATIAPLAFYTIATLSSV 631
            :|.|..|.|                  :||:|  ..:|:|..:|                     
  Fly   593 EFTCKDCGPGLWPYADKLSCYALDIQYMKWNSLFALIPMAIAIF--------------------- 636

  Fly   632 GIAL---AIAFLAFNLHFRKLKAIKLSSPKLSNITAVGCIFVYATVILLGLDHSTLPSAEDSFAT 693
            ||||   .|...|.| |...|  ::.|..:||.....|.:..|.....| :...|:.|       
  Fly   637 GIALTSIVIVLFAKN-HDTPL--VRASGRELSYTLLFGILVCYCNTFAL-IAKPTIGS------- 690

  Fly   694 VCTARVYLLSAGFSLAFGSMFAKTYRVHRIF-TRTGSVFKDKMLQDIQLILLVGGLLLVDALLVT 757
             |..:.:.:..|||:.:.::..||.|:.||| :.:.|..:.|.:.....:::...|:.:..|:..
  Fly   691 -CVLQRFGIGVGFSIIYSALLTKTNRISRIFHSASKSAQRLKYISPQSQVVITTSLIAIQVLITM 754

  Fly   758 LWVVTDPMERHLHNLTLEISATDRSVVYQPQVEV---CRSQHTQTWLSVLYA--YKGLLLVVGVY 817
            :|:|.:|.....:              |..:.||   |:.|.    :|.|::  |..:|:.:...
  Fly   755 IWMVVEPPGTRFY--------------YPDRREVILKCKIQD----MSFLFSQLYNMILITICTI 801

  Fly   818 MAWETRHVKIPA-LNDSQYIGVSVYSV-VITSAIVVV---LANLISERVTLAFITITALILTSTT 877
            .|.:||  |||. .|:|::||.::|:. :|..|.|.:   ..|....:.|...|:|:   |:::.
  Fly   802 YAIKTR--KIPENFNESKFIGFTMYTTCIIWLAFVPIYFGTGNSYEVQTTTLCISIS---LSASV 861

  Fly   878 ATLCLLFIPKLHDIWARNDIIDPVIHSMGLKMECNTRRFVVDDRRELQYRVEVQNRVYKKEIQAL 942
            |.:| |:.||::.:         |.|.     :.|.|:..::            :.||::...| 
  Fly   862 ALVC-LYSPKVYIL---------VFHP-----DKNVRKLTMN------------STVYRRSAAA- 898

  Fly   943 DAEIRKLERLLESGLTTT---STTTSSSTSLLTGG 974
                      :..|..|:   |.|.:..||.||||
  Fly   899 ----------VAQGAPTSSGYSRTHAPGTSALTGG 923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABA-B-R3NP_001245826.1 PBP1_GABAb_receptor 157..590 CDD:107361 116/581 (20%)
ANF_receptor 174..568 CDD:279440 103/491 (21%)
7tm_3 633..889 CDD:278433 66/269 (25%)
mGluRNP_001259076.1 Periplasmic_Binding_Protein_Type_1 43..542 CDD:299141 115/533 (22%)
ANF_receptor 72..518 CDD:279440 102/480 (21%)
NCD3G 557..604 CDD:284890 6/46 (13%)
7tm_3 638..873 CDD:278433 66/270 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 67 1.000 Domainoid score I3495
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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