DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GABA-B-R3 and GRM7

DIOPT Version :9

Sequence 1:NP_001245826.1 Gene:GABA-B-R3 / 33248 FlyBaseID:FBgn0031275 Length:1305 Species:Drosophila melanogaster
Sequence 2:NP_870989.1 Gene:GRM7 / 2917 HGNCID:4599 Length:922 Species:Homo sapiens


Alignment Length:1027 Identity:203/1027 - (19%)
Similarity:374/1027 - (36%) Gaps:283/1027 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 RNHGKIVLLGLFELSTSRGP---------RPDGLSELGAATMAVEHINR-KRLLPGYTL------ 196
            |..|.:.|.|||.:. ::||         |.:|:..|.|...|::.||. ..|||..||      
Human    44 RIEGDVTLGGLFPVH-AKGPSGVPCGDIKRENGIHRLEAMLYALDQINSDPNLLPNVTLGARILD 107

  Fly   197 --------------------ELVTNDTQCDPGVGVDRFFHAIYTQPSTRMVMLLGSACSEVTESL 241
                                :..|:|.:|..|.      ..::.:|. ::|.::|::.|.|:..:
Human   108 TCSRDTYALEQSLTFVQALIQKDTSDVRCTNGE------PPVFVKPE-KVVGVIGASGSSVSIMV 165

  Fly   242 AKVVPYWNIVQVSFGSTSPALSDRREFPYFYRTVAPDSSHNPARIAFIRKFGWGTVTTFSQNEEV 306
            |.::..:.|.|:|:.||:|.|||.|.:.:|.|.|.|||....|.:..::..||..|:|.:.....
Human   166 ANILRLFQIPQISYASTAPELSDDRRYDFFSRVVPPDSFQAQAMVDIVKALGWNYVSTLASEGSY 230

  Fly   307 HSLAVNNLVTEL--EAANISCAATITF------AATDFKEQLLLLRET-DTRIIIGSFSQELAPQ 362
            ....|.:. |::  ||..:..|.::..      ...||...:..|.:| ::|.::...:.|...|
Human   231 GEKGVESF-TQISKEAGGLCIAQSVRIPQERKDRTIDFDRIIKQLLDTPNSRAVVIFANDEDIKQ 294

  Fly   363 ILCEAYRLRMFGADYAWILHESMGAPWWPDQRTACSNHELQLAVENLIVVSTHNSIVGNNVSYSG 427
            ||..|.|....| .:.|:..:|.|:...|       .|:.:...|..|.:....:.|      .|
Human   295 ILAAAKRADQVG-HFLWVGSDSWGSKINP-------LHQHEDIAEGAITIQPKRATV------EG 345

  Fly   428 LNNHMFNSQLRKQSAQFHGQDGFGSGYGSRISIAATQSDSRRRRRRG---VGGTSGGHLFPEAIS 489
            .:.:..:..|..........:.:...:..:::|:.::.:...|:..|   :|..|  :...|...
Human   346 FDAYFTSRTLENNRRNVWFAEYWEENFNCKLTISGSKKEDTDRKCTGQERIGKDS--NYEQEGKV 408

  Fly   490 QYAPQTYDAVWAIALALRAAEEHWRRN---------EEQSKLDGFDYTRSDMAWEFLQQMGKLHF 545
            |:   ..|||:|:|.||    .|..::         .|..:..|         .:.|:.:..::|
Human   409 QF---VIDAVYAMAHAL----HHMNKDLCADYRGVCPEMEQAGG---------KKLLKYIRNVNF 457

  Fly   546 LGVSG-PVSFS-GPDRVGTTAFYQIQ-----------------------------RGL------- 572
            .|.:| ||.|: ..|..|....:|.|                             :|:       
Human   458 NGSAGTPVMFNKNGDAPGRYDIFQYQTTNTSNPGYRLIGQWTDELQLNIEDMQWGKGVREIPASV 522

  Fly   573 ----------------------LEPVALYYPATDALDFRCPRC----RPVKWHSG--QVPIAKRV 609
                                  .||...|....|  :..|..|    ||.:..:|  .:||.|..
Human   523 CTLPCKPGQRKKTQKGTPCCWTCEPCDGYQYQFD--EMTCQHCPYDQRPNENRTGCQDIPIIKLE 585

  Fly   610 FKLRVATIAPLAFYTIATLSSVGIALAIAFLAFNLHFRKLKAIKLSSPKLSNITAVGCIFVYATV 674
            :.      :|.|...: .|:.:||...|..:|..:.:.....::.|..:||.:...|....|...
Human   586 WH------SPWAVIPV-FLAMLGIIATIFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIIT 643

  Fly   675 ILLGLDHSTLPSAEDSFATVCTARVYLLSAGFSLAFGSMFAKTYRVHRIFTR-TGSVFKDKMLQD 738
            .|:        .|:...| ||:.|...|..|..:::.::..||.|::|||.: ..||...:::..
Human   644 FLM--------IAKPDVA-VCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISP 699

  Fly   739 IQLILLVGGLLLVDALLVTLWVVTDPMERHLHNLTLEISATDRSVVYQPQVE--VCRSQHTQTWL 801
            ...:.:...|:.|..|.|.:|...||     .|:.::.   |......|:..  |.:...|...:
Human   700 TSQLAITSSLISVQLLGVFIWFGVDP-----PNIIIDY---DEHKTMNPEQARGVLKCDITDLQI 756

  Fly   802 SVLYAYKGLLLVVGVYMAWETRHVKIPALNDSQYIGVSVYSV-VITSAIVVVLANLI--SERVTL 863
            .....|..||:|.....|.:||.|. ...|:::.||.::|:. ::..|.:.:.....  :|::.:
Human   757 ICSLGYSILLMVTCTVYAIKTRGVP-ENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYI 820

  Fly   864 AFITITALILTSTTATLCLLFIPKLHDIWARNDIIDPVIHSMGLKMECNTRRFVVDDRRELQYRV 928
            ...|:|..:..|.:..|.:|::||::.|         :.|.                    :..|
Human   821 QTTTLTISMNLSASVALGMLYMPKVYII---------IFHP--------------------ELNV 856

  Fly   929 EVQNRVYKKEIQALDAEIRKLERLLESGLTTTSTTTSSSTSLLTGGGHLKPELTVTSGISQTPAA 993
            :.:.|.:|..:.|                                       .|::|.:|..|:.
Human   857 QKRKRSFKAVVTA---------------------------------------ATMSSRLSHKPSD 882

  Fly   994 SKN---RTPSISGILPNLLLSVLPPVIPRASWPSAEYMQIPMRRSVTFASQP 1042
            ..|   :|.....:.||   :.:|||  |.|          :::|||:.:.|
Human   883 RPNGEAKTELCENVDPN---NCIPPV--RKS----------VQKSVTWYTIP 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABA-B-R3NP_001245826.1 PBP1_GABAb_receptor 157..590 CDD:107361 108/549 (20%)
ANF_receptor 174..568 CDD:279440 94/443 (21%)
7tm_3 633..889 CDD:278433 57/261 (22%)
GRM7NP_870989.1 PBP1_mGluR_groupIII 47..511 CDD:107371 105/504 (21%)
ANF_receptor 77..484 CDD:279440 95/446 (21%)
Glutamate binding. /evidence=ECO:0000250 180..182 0/1 (0%)
NCD3G 521..567 CDD:284890 6/47 (13%)
7tm_3 602..847 CDD:278433 57/262 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 874..895 5/20 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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