Protein Alignment GABA-B-R3 and stam2

DIOPT Version :9

• Sequence 1: NP_001245826.1
• Gene: GABA-B-R3 / 33248
• FlyBaseID: FBgn0031275
• Length: 1305
• Species: Drosophila melanogaster
• Sequence 2: XP_002936702.1
• Gene: stam2 / 100490315
• XenbaseID: XB-GENE-491139
• Length: 522
• Species: Xenopus tropicalis
• Alignment Length: 541
• Identity: 99/541 - (18%)
• Similarity: 178/541 - (32%)
• Gaps: 186/541 - (34%)

  Fly   768 HLHNLTLEISATDRSVVYQPQVEVCRSQHTQTWLSVLYAYKGLLLVVGVYMAWETRHVKIPALND 832
            ||...:.|.::..|.|:.:...:||..            .|.|:      :.||....|     |
 Frog    81 HLEICSREFASEVRGVISKAHPKVCDK------------LKALM------VEWEQEFQK-----D 122

  Fly   833 SQYIGVSVYSVVITSAIVVVLANLISERVTLAFITITALILTSTTATLCLLFIPKLHDIWARNDI 897
            .|:           |.|...:.:|..|.::....|..:   ||.|        ||...:.|::..
 Frog   123 PQF-----------SLISATIKSLKEEGISFPSSTPQS---TSNT--------PKNSALPAKSKE 165

  Fly   898 IDPVIHSMGLKMECNTRRFVVDDRRELQYRVEVQNRVYKKEIQALDAEIRKL---ERLLESGLTT 959
            .|.:..::.|.::.:.::..  :.:.|...|:.|:     :.|.:..::|.|   |.:.::.||.
 Frog   166 EDDIAKAIELSLQEHKQQST--ETKTLYPSVDAQH-----DSQKMARKVRALYDFEAVEDNELTF 223

  Fly   960 TS-----TTTSSSTSLLTGGGH----LKPELTVTSGISQTPAASKNRTPSISGILPNLLLSVLPP 1015
            .|     ....|..:...|..|    |.|...|:|.::..|.....:.|         :|..:|.
 Frog   224 KSGEIIIVLDDSDANWWKGENHRGVGLFPSNFVSSSLNMEPEEVLEKNP---------VLEEIPE 279

  Fly  1016 VIPRASWPSAEYMQ-------IPMRRSVTFASQPQ--------LEEACLPAQDLINLRLAHQQAT 1065
            ..|:|. |...::.       :.:.:|:. .:.|:        ||:.|.....:|:.||..
 Frog   280 SAPKAE-PEPVFIDEGKMDHALQLLQSID-PTDPKPDSSALLDLEDVCQQMGPMIDDRLQE---- 338

  Fly  1066 EAKTGLINRLRGIFSRTTSSNKGSTASLADQKGLKAAFKSHMGLFTRLIPSSQTASCNAIYNNPN 1130
                  |:|            |.|..|..:.|.::|     :.|:.:|:   ..|...::||.|
 Frog   339 ------IDR------------KHSELSELNVKVMEA-----VELYNKLM---NEAPMYSVYNKP- 376

  Fly  1131 QDSIPSEASSH-PNGNHLKPIHRGSLTKSGTHLDHLTKDPNFLPIPTISGGEQGDQTLGGKYVKL 1194
                  :|..| |.|..::..|                                .|..||.|:
 Frog   377 ------QAQGHYPAGVSMQSYH--------------------------------SQAQGGSYM-- 401

  Fly  1195 LETKVNFQLPSNRRPSVVQQPPSLRERVRGSPRFPHRILPPTCSLSALAESEDRPGDS------- 1252
                  .|.....:|:.:.|..|:.....|    |.|.||||.:.:...::...|..|
 Frog   402 ------VQSMPQVQPATLPQGYSMASDHIG----PLRSLPPTLNSTVTTQAAQPPYPSSGHDAVS 456

  Fly  1253 -------TSILGSCKSIPRIS 1266
                   :|.|.|...:|..|
 Frog   457 NSPYLNQSSALHSAAGLPAYS 477

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GABA-B-R3	NP_001245826.1	PBP1_GABAb_receptor	157..590	CDD:107361
		ANF_receptor	174..568	CDD:279440
		7tm_3	633..889	CDD:278433	24/120 (20%)
stam2	XP_002936702.1	VHS_ENTH_ANTH	9..145	CDD:383016	18/97 (19%)
		SH3_STAM2	204..260	CDD:212896	13/55 (24%)
		PTZ00395	<376..>517	CDD:185594	28/153 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910