DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABA-B-R3 and gucy2g

DIOPT Version :9

Sequence 1:NP_001245826.1 Gene:GABA-B-R3 / 33248 FlyBaseID:FBgn0031275 Length:1305 Species:Drosophila melanogaster
Sequence 2:XP_009305067.2 Gene:gucy2g / 100333350 ZFINID:ZDB-GENE-130531-70 Length:1127 Species:Danio rerio


Alignment Length:1235 Identity:223/1235 - (18%)
Similarity:394/1235 - (31%) Gaps:369/1235 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 GLFELSTS-RGPR----PDGLSELGAA-TMAVEHINRKRLLPG-YTLELVTNDTQCDPGVGVDRF 214
            |.|:|:.. :.||    |..|..||:| .:|::.||....|.| :|.:.|..||.|:....:..|
Zfish    32 GQFKLTVGLQAPRNISYPFSLLRLGSAMQIAMDKINSNPALSGNFTFDFVYMDTDCNAKTSLRGF 96

  Fly   215 FHAIYTQPSTRMVMLLGSACSEVTESLAKVVPYWNIVQVSFGSTSPALSDRREFPYFYRTVAPDS 279
            ...:..|   .:..|.|..|.|..|....:...|||....|...:|.:.:.:.:..:.:.|.|..
Zfish    97 IEQVMEQ---NVSALFGPPCPEEAEVTGLIASTWNIPMFGFVGQTPKMDNIQVYDTYIKIVPPLK 158

  Fly   280 SHNPARIAFIRKFGWGTVTTFSQNEEVHSL----AVNNLVTELEAANISCAATITFAATDF---K 337
            ......:..:..|||..|.......:.::.    |:...|.:...:.::....|.|..:|.   |
Zfish   159 RVGEILLKALEFFGWKHVGMIGGGADANTWDSVEALWKSVDQQLRSKVTVTMGIKFDTSDLEQAK 223

  Fly   338 EQLLLLRETDTRIIIGSFSQELAPQILCEAYRLRMFGADYAWILHESMGAPWWPDQ--RTACS-- 398
            ..|.::.:. .|:::...:.|.:..::.||.:|.:...:|.::|.:........|.  :|:.|  
Zfish   224 RNLQIISKV-ARVVVVLANAEDSTAMMIEAQKLGLMSGEYVFLLVQQFEVSGKVDNLWKTSVSET 287

  Fly   399 NHELQLAVENLIVVSTHNSIVGNNVSYSGLNNHMFNSQLRKQSAQFHGQDGFGSGYGSRISIAAT 463
            |..:..|.:.:.|::        ..||.|.:.:.|..|...:..        |..:.|.:|..  
Zfish   288 NRTMLKAFDMVFVLA--------EKSYDGYDYYDFFDQAYDKLK--------GDPFYSNLSSV-- 334

  Fly   464 QSDSRRRRRRGVGGTSGGHLFPEAISQYAPQTYDAVWAIALALRAAEEHWRRNEEQSKLDGFDYT 528
                                  :.:|.||...:|||...|:.|:.|.:           .|.|..
Zfish   335 ----------------------KEVSSYAAYLHDAVLLYAMGLKEAFK-----------SGKDIR 366

  Fly   529 RSDMAWEFLQQMGKLHFLGVSGPVSFSGPDRVGTT----AFYQIQR-----------------GL 572
            ......:.|:....:.|.|.||.|.|   |..|..    :.|.:|:                 .:
Zfish   367 HGREIVQKLRDRTSIRFYGASGLVHF---DEYGERNLDYSVYDLQQTETLIQFVSVLDFDSHTKM 428

  Fly   573 LEPVALY--------YPATDALDFRCPRC----RPVKWHSGQVPIAKRVFKLRVATIAPLAFYTI 625
            ::|...:        .|.||.     |.|    ...:|...::.:...:..|.:..:|.::..|:
Zfish   429 IKPTLRFSNIVWQNGKPPTDN-----PSCGFDNELCEWLDNEISLLVLLVALPLIGVAAVSLITL 488

  Fly   626 ATLSSVGIALAIA----FLAFNLHFRKLKAIKLSSPKLSNITAVGCIFVYATVILLGLDHSTLPS 686
            .||..:.:...:.    :|   :::..:..::  .||.:.|.:|                :|.||
Zfish   489 LTLQKLRLQSRLDESNWWL---INYSDITILR--EPKGTQILSV----------------NTTPS 532

  Fly   687 AEDS-------FATVCTAR--VYLLSAGFSLAFGSMFAKTYRVHRI---FTRTGSVFKDKMLQDI 739
            ...|       .:..|..|  :|   |...|..|:.....|..::|   ..:...:.:..||:::
Zfish   533 KCGSGGSQSMLSSNSCNTREAIY---ATVGLFQGNEVGIKYLKNQIIPDIKKPSIIAEFNMLKEM 594

  Fly   740 Q---LILLVGGLL----------------LVDAL------------LVTLWVVTDPMERHLHNLT 773
            :   |:...|..:                |.|.|            |...:.:.:.|| ::|..:
Zfish   595 KHENLVQFFGVCIDPPNVCIVMQYCKKGSLKDVLGNHEIDLDWMFKLSFAYDIVNGME-YIHKSS 658

  Fly   774 LEISATDRSVVYQPQVEVCRSQHTQTWLSVLYAYKGLLLVVGVYMAWE----TRHVKIP------ 828
            |:                   .|.....|.......|.:.:..:..||    |:|..||      
Zfish   659 LK-------------------SHGNLRPSTCLVDSRLQIKLSGFGLWEFKCGTKHRLIPLDSPKY 704

  Fly   829 ----------------ALNDSQYIGVSVYSVVI------------------TSAIVVVLANLISE 859
                            ..|.:|...|..::::|                  ...|:..|...:||
Zfish   705 EEMYWTAPEFLREIFYPFNGTQKGDVYSFAIIIRELIYSTEVGPYHDVHLEPKEIIKQLRTPMSE 769

  Fly   860 ---RVTLAFITITALILTSTTATLC-LLFIPKLHDIWARNDIIDPVIHSMGLKMECNTRRFVVDD 920
               |.||             :|.:| ...||.:...|:.|....|...|:               
Zfish   770 EPLRPTL-------------SADICDERLIPLIKACWSENPDHRPPFGSI--------------- 806

  Fly   921 RRELQYRVEVQNRVYKKEIQALDAEIRKLERLLESGLTTTSTTTSSSTSLLTGGGHLKPELTVTS 985
            ||:|      ::...:.....||..:.|||:.                     ..||  |..|..
Zfish   807 RRQL------RDACPESHANILDNMVNKLEKY---------------------ANHL--EEVVEE 842

  Fly   986 GISQTPAASKNRTPSISGILPNLLLSVL---PPVIPRASWPSAEYMQIPMRRSVTFASQPQLEEA 1047
            ..||...........:|.:||..:...|   ..|.||    |.|.:.|.....|.|.:...:..|
Zfish   843 RTSQLTVEKSRADKLLSSMLPRYIADQLMAGKSVEPR----SYEMVTIFFSDIVGFTTMCSVSSA 903

  Fly  1048 CLPA----------QDLINLRLAHQQATEAKTGLINRLRGIFSRTTSSNKGSTASLADQKGLKAA 1102
            ....          .|:|.|...::..|.....::.....|.:.|..:.:.||.:|.....:| .
Zfish   904 LEVVTLLNDLYSLFDDIIKLYDVYKVETIGDAYMVASGLPISNGTLHAEEISTMALHFLSSIK-R 967

  Fly  1103 FKSHMGLFTRLIPSSQTASCNAIYNNP---------------NQDSIPSEASSHPNGNHLKPIHR 1152
            ||      .|.:|:.:.|....|.:.|               ..|::.:.:....|...||    
Zfish   968 FK------IRHLPNERLALRIGINSGPVVAGVVGSTMPRYCLFGDTVNTASRMESNSLPLK---- 1022

  Fly  1153 GSLTKSGTHLDHLTKDPNFLPIPTISGGEQGDQTLGGKYVK---LLETKVNFQLP-----SNRRP 1209
                   .|:...|.| ..|.|.|....|:||..:.||..:   .|.:|..|..|     ||..|
Zfish  1023 -------IHISQSTAD-ILLTIGTFELEERGDIEIKGKGTQKTFWLLSKPGFTFPPTGQDSNPSP 1079

  Fly  1210  1209
            Zfish  1080  1079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABA-B-R3NP_001245826.1 PBP1_GABAb_receptor 157..590 CDD:107361 92/479 (19%)
ANF_receptor 174..568 CDD:279440 80/410 (20%)
7tm_3 633..889 CDD:278433 53/350 (15%)
gucy2gXP_009305067.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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