DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eaat2 and SLC1A1

DIOPT Version :9

Sequence 1:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster
Sequence 2:XP_011516309.1 Gene:SLC1A1 / 6505 HGNCID:10939 Length:547 Species:Homo sapiens


Alignment Length:504 Identity:210/504 - (41%)
Similarity:314/504 - (62%) Gaps:48/504 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 YRRWLSENLMLLVTLSGVLL-----------------------GVILGLSLRP-LNLHGDSIMLI 82
            ::|:|..|.:||.|::.|:|                       |:..|:.:|. .||........
Human    11 WKRFLKNNWVLLSTVAAVVLDCKPHGDPDHMSSTELSKVVVCTGITTGVLVREHSNLSTLEKFYF 75

  Fly    83 SYPGELFMRVLKLMILPLVISSLIAGSASLNAKMNGKIALRTLVYFASTSFFNAALGIALVLLIH 147
            ::|||:.||:|||:||||:|||:|.|.|:|::.::|||.||.:||:..|:.....|||.||:.|.
Human    76 AFPGEILMRMLKLIILPLIISSMITGVAALDSNVSGKIGLRAVVYYFCTTLIAVILGIVLVVSIK 140

  Fly   148 PGNPDLHNADDRSTDRRAVNLLDSLLDLGRNVFPDNLFQASIQQAHT----VYLPKPSILHVFNE 208
            ||.........|:.....|:.:|::|||.||:||:||.||..||..|    |..|....:::..|
Human   141 PGVTQKVGEIARTGSTPEVSTVDAMLDLIRNMFPENLVQACFQQYKTKREEVKPPSDPEMNMTEE 205

  Fly   209 TMNDTLASGSEAQRLSEDLTEDVVLVRDIQYRSGTNTLGIVFFCLVFGTFLGTIGQKGQVVVDFF 273
            :....:.:.     :|::.|::..:|.  .|..|.|.||::.||||||..:|.:|:|||::||||
Human   206 SFTAVMTTA-----ISKNKTKEYKIVG--MYSDGINVLGLIVFCLVFGLVIGKMGEKGQILVDFF 263

  Fly   274 AAIFEVIMKMVTCVMWLTPVGISSVIAGKILSVGD------LGLVMSQLMWFIVTVAIGVFIYQF 332
            .|:.:..||:|..:|...|:||..:|||||:.|.|      |||.|:       ||..|:.|:..
Human   264 NALSDATMKIVQIIMCYMPLGILFLIAGKIIEVEDWEIFRKLGLYMA-------TVLTGLAIHSI 321

  Fly   333 VVMQAIYFVVVRRNPFKFYAGLIQAMLTAFATASTAAALPITFRCMNEKLKVDPRITRFVLPIGC 397
            |::..|||:|||:|||:|..|:.||:|||...:|::|.||:||||..|..:||.||||||||:|.
Human   322 VILPLIYFIVVRKNPFRFAMGMAQALLTALMISSSSATLPVTFRCAEENNQVDKRITRFVLPVGA 386

  Fly   398 NINMDGTALYIAVASIFIAQMSGMVLGFGELLTVLLTSTAASMSSASVPSAALVLLLVVLTAIDA 462
            .|||||||||.|||::||||::.:.||.|:::|:.:|:|:||:.:|.||.|.||.:::||:|:..
Human   387 TINMDGTALYEAVAAVFIAQLNDLDLGIGQIITISITATSASIGAAGVPQAGLVTMVIVLSAVGL 451

  Fly   463 PVQDVTLLFAVDWFVDRIRTTNNMLGDCYTAAVVEELSRKELMALDAAS 511
            |.:||||:.||||.:||.||..|:|||.:...:||:||:|||..:|.:|
Human   452 PAEDVTLIIAVDWLLDRFRTMVNVLGDAFGTGIVEKLSKKELEQMDVSS 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat2NP_001162844.1 SDF 51..496 CDD:278787 198/478 (41%)
SLC1A1XP_011516309.1 SDF 74..488 CDD:278787 190/427 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm40767
orthoMCL 1 0.900 - - OOG6_100309
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.730

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