DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eaat2 and Slc1a4

DIOPT Version :9

Sequence 1:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_061349.3 Gene:Slc1a4 / 55963 MGIID:2135601 Length:532 Species:Mus musculus


Alignment Length:514 Identity:179/514 - (34%)
Similarity:292/514 - (56%) Gaps:48/514 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MEKSGKFSDYLFAKMGPPTSTELPPKTT-----ECSDAPVELTGYRRWLSENLMLLVTLSGVLLG 62
            |||||:.:.||......|.:....|:|.     .|:      :.:||    :.::|:|:||||:|
Mouse     1 MEKSGETNGYLDGTQAEPAAGPRTPETAMGKSQRCA------SFFRR----HALVLLTVSGVLVG 55

  Fly    63 VILGLSLRPLNLHGDSIMLISYPGELFMRVLKLMILPLVISSLIAGSASLNAKMNGKIALRTLVY 127
            ..:|.:||.|.|....|..:::|||:.:|:|:::|||||:.||::|:|||:|...|::....:.|
Mouse    56 AGMGAALRGLQLTRTQITYLAFPGEMLLRMLRMIILPLVVCSLVSGAASLDASSLGRLGGIAVAY 120

  Fly   128 FASTSFFNAALGIALVLLIHPG---------NPDLHNADDRSTDRRAVNLLDSLLDLGRNVFPDN 183
            |..|:...:||.:||..:|.||         :..|.|:......:..|   ||.|||.||:||.|
Mouse   121 FGLTTLSASALAVALAFIIKPGAGAQTLQSSSLGLENSGPPPVSKETV---DSFLDLLRNLFPSN 182

  Fly   184 LFQASIQQAHTVYLPKPSILHVFNETMNDTLASGSEAQRLSEDLTEDVVLVRDIQYRSGTNTLGI 248
            |..|:...:.|.|           ..:....:||:..:       |.:.:|.|::   |.|.||:
Mouse   183 LVVAAFTTSATDY-----------TVVTHNTSSGNVTK-------EKIPVVTDVE---GMNILGL 226

  Fly   249 VFFCLVFGTFLGTIGQKGQVVVDFFAAIFEVIMKMVTCVMWLTPVGISSVIAGKILSVGDLGLVM 313
            |.|.||.|..|..:|.:|:.::.||.:..|..|.:|:.:||..|:||..:|..||:.:.|:.:::
Mouse   227 VLFALVLGVALKKLGPEGEDLIRFFNSFNEATMVLVSWIMWYVPIGIMFLIGSKIVEMKDIVMLV 291

  Fly   314 SQLMWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKFYAGLIQAMLTAFATASTAAALPITFRCM 378
            :.|..:|....:|..|:..:|:..:||...|:|||.|..||:....|||||.|::|.||...:|:
Mouse   292 TSLGKYIFASMLGHVIHGGIVLPLVYFAFTRKNPFTFLLGLLTPFATAFATCSSSATLPSMMKCI 356

  Fly   379 NEKLKVDPRITRFVLPIGCNINMDGTALYIAVASIFIAQMSGMVLGFGELLTVLLTSTAASMSSA 443
            .|...||.||:||:||||..:||||.|::..||::||||::.:.|..|::.|:|:|:||:|:.:|
Mouse   357 EENNGVDKRISRFILPIGATVNMDGAAIFQCVAAVFIAQLNNVDLNAGQIFTILVTATASSVGAA 421

  Fly   444 SVPSAALVLLLVVLTAIDAPVQDVTLLFAVDWFVDRIRTTNNMLGDCYTAAVVEELSRK 502
            .||:..::.:.::|.||..|..|::|:.||||.|||..|..|:.||...|.::..|::|
Mouse   422 GVPAGGVLTIAIILEAIGLPTHDLSLILAVDWIVDRTTTVVNVEGDALGAGILNHLNQK 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat2NP_001162844.1 SDF 51..496 CDD:278787 164/453 (36%)
Slc1a4NP_061349.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 10/27 (37%)
SDF 44..477 CDD:278787 164/456 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 495..532
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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