DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eaat2 and slc1a3b

DIOPT Version :9

Sequence 1:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_001177232.1 Gene:slc1a3b / 556181 ZFINID:ZDB-GENE-090708-3 Length:537 Species:Danio rerio


Alignment Length:488 Identity:204/488 - (41%)
Similarity:320/488 - (65%) Gaps:25/488 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 WLSENLMLLVTLSGVLLGVILGLSLRPLNLHGDSIMLISYPGELFMRVLKLMILPLVISSLIAGS 109
            :|..|..:|.|:..|:.|:.||.:||...:....:...|:||||.||:|::::|||::||||.|.
Zfish    44 FLRRNAFVLFTIGAVVFGITLGFALRSYKMSYREVKYFSFPGELLMRMLQMLVLPLLVSSLITGM 108

  Fly   110 ASLNAKMNGKIALRTLVYFASTSFFNAALGIALVLLIHPGNPDLHNADDRSTDRRAVNLL---DS 171
            |:|:::.:||:.:|.::|:.:|:|....:||.:||:||||.    .:.|..|.::.:..:   |:
Zfish   109 AALDSRASGKMGMRAVIYYMTTTFIAVFIGIIMVLIIHPGK----GSKDEFTKQQKIEQVSPADA 169

  Fly   172 LLDLGRNVFPDNLFQASIQQAHTVYLPKPSILHVFNETMNDTLASGSEAQRLSEDLTEDVVLVRD 236
            .|||.||:||.||.||..||..|.|..:  |:|| ...:||::.:.:.|.:  |...|:|:.:..
Zfish   170 FLDLIRNMFPPNLVQACTQQFKTQYGKR--IIHV-KMIVNDSIFNLTNATQ--EIAQEEVIPLSG 229

  Fly   237 IQYRSGTNTLGIVFFCLVFGTFLGTIGQKGQVVVDFFAAIFEVIMKMVTCVMWLTPVGISSVIAG 301
            .  .:|.|.||:|.|.:.||..:|.:.::||.:.|||.::.|.||::|..:||..|:||..:|||
Zfish   230 T--TNGVNALGLVVFSMCFGLIIGNMKEQGQALRDFFDSLNEAIMRLVAIIMWYAPIGILFLIAG 292

  Fly   302 KILSVGDLGLVMSQLMWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKFYAGLIQAMLTAFATAS 366
            ||:.:.|:..:..||..:.|||.||:.|:..:::..:|||:.|:|||.|..||:||::||..|:|
Zfish   293 KIVEMDDITAMGGQLGMYTVTVIIGLMIHGIIILPTLYFVITRKNPFIFITGLLQALITALGTSS 357

  Fly   367 TAAALPITFRCMNEKLKVDPRITRFVLPIGCNINMDGTALYIAVASIFIAQMSGMVLGFGELLTV 431
            ::|.|||||:|:.|..|||.|:||||||:|..|||||||||.|:|:|||||::.|.:.||:::|:
Zfish   358 SSATLPITFKCLEENNKVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNMEMNFGQIITI 422

  Fly   432 LLTSTAASMSSASVPSAALVLLLVVLTAIDAPVQDVTLLFAVDWFVDRIRTTNNMLGDCYTAAVV 496
            .:|:||||:.:|.:|.|.||.:::|||::..|..|:||:.|||||:||:|||.|:|||...|.::
Zfish   423 SITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRTTTNVLGDSIGAGII 487

  Fly   497 EELSRKELMALD---AASV--------NYQDMP 518
            |.||:.||...|   .:||        .||.:|
Zfish   488 EFLSKDELQGGDVELGSSVLEENELKKPYQKIP 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat2NP_001162844.1 SDF 51..496 CDD:278787 191/447 (43%)
slc1a3bNP_001177232.1 SDF 50..487 CDD:278787 191/447 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm25669
orthoMCL 1 0.900 - - OOG6_100309
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.730

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