DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eaat2 and slc1a2b

DIOPT Version :9

Sequence 1:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_956273.2 Gene:slc1a2b / 335836 ZFINID:ZDB-GENE-030131-7779 Length:562 Species:Danio rerio


Alignment Length:537 Identity:228/537 - (42%)
Similarity:349/537 - (64%) Gaps:30/537 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PVELTGYRRW------LSENLMLLVTLSGVLLGVILGLSLRPLNLHGDSI-MLISYPGELFMRVL 93
            |:|.....:|      :.:||:|.:|:.||::|.:.|:.||..:...|:| |:|::||::.||:|
Zfish    17 PIEARPLSKWGTICQKMRKNLLLTLTVMGVIMGAVSGMLLRVASPIDDNIVMVIAFPGDILMRML 81

  Fly    94 KLMILPLVISSLIAGSASLNAKMNGKIALRTLVYFASTSFFNAALGIALVLLIHPGNPDLHNADD 158
            |::||||:|||||.|.|.|:||.:|::..|.::|:.:|:...|.||:.||||||||||.|.....
Zfish    82 KMLILPLIISSLITGLAGLDAKSSGRLGSRAMIYYMTTTVIAAVLGVILVLLIHPGNPKLKENLG 146

  Fly   159 RSTDRRAVNLLDSLLDLGRNVFPDNLFQASIQQAHTVYLPKPSI---LHVFNETMNDTLASGSEA 220
            ...:...|:.||:..||.||:||:||.||..||..|| :.|..:   |...|.||::.|::.::.
Zfish   147 EGLENDEVSSLDAFFDLIRNLFPENLVQACFQQIQTV-VKKVEVQPDLDDTNSTMSEYLSNATKP 210

  Fly   221 QRLSEDLTEDVVLVRDIQYRSGTNTLGIVFFCLVFGTFLGTIGQKGQVVVDFFAAIFEVIMKMVT 285
            ..:.:|       .:.:|::||.|.||::.|.:.||..:|.:|:|.::::|||..:.|::||:|.
Zfish   211 PPIFKD-------KKSLQFKSGMNVLGLIGFFIAFGICMGKMGEKARLMIDFFNILNEIVMKLVI 268

  Fly   286 CVMWLTPVGISSVIAGKILSVGDLGLVMSQLMWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKF 350
            .:||.:|.||:.:|.|||:|:.||.:|..||..:::||.:|:.|:..:.:..|||.:||:|||.|
Zfish   269 MIMWYSPFGIACLICGKIISIKDLEVVARQLGMYMITVIVGLIIHGAIFLPCIYFAIVRKNPFSF 333

  Fly   351 YAGLIQAMLTAFATASTAAALPITFRCMNEKLKVDPRITRFVLPIGCNINMDGTALYIAVASIFI 415
            :.|:.||.:||..|||:|..||:||||:.|.|.:|.|:||||||:|..|||||||||.|||:|||
Zfish   334 FMGIFQAWITALGTASSAGTLPVTFRCLEENLGIDKRVTRFVLPVGATINMDGTALYEAVAAIFI 398

  Fly   416 AQMSGMVLGFGELLTVLLTSTAASMSSASVPSAALVLLLVVLTAIDAPVQDVTLLFAVDWFVDRI 480
            |||:|:.|..|:::||.||:|.||:.:||:|||.||.:|::|||:..|.||::||.||||.:||.
Zfish   399 AQMNGIDLDPGQIVTVSLTATLASVGAASIPSAGLVTMLLILTAVGLPTQDISLLVAVDWLLDRF 463

  Fly   481 RTTNNMLGDCYTAAVVEELSRKELMALDAASVNYQD--MPAGTPNGHGHGHGHHDGGLLEGQTEL 543
            ||:.|::||.|.|.:|..||:.||.||||......|  |...|.:.:.....||:          
Zfish   464 RTSVNVVGDSYGAGIVYHLSKAELDALDAQHGKTDDIEMMTKTQSYYDDLKNHHE---------- 518

  Fly   544 ETSSKCVMTMTDSVVVD 560
            ..|::||....::.:||
Zfish   519 NNSNQCVFAAQNTGLVD 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat2NP_001162844.1 SDF 51..496 CDD:278787 204/448 (46%)
slc1a2bNP_956273.2 SDF 38..482 CDD:278787 205/451 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 411 1.000 Domainoid score I653
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 431 1.000 Inparanoid score I1691
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm25669
orthoMCL 1 0.900 - - OOG6_100309
Panther 1 1.100 - - O PTHR11958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.980

Return to query results.
Submit another query.