DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eaat2 and slc1a3a

DIOPT Version :9

Sequence 1:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_997805.1 Gene:slc1a3a / 323439 ZFINID:ZDB-GENE-030131-2159 Length:537 Species:Danio rerio


Alignment Length:493 Identity:211/493 - (42%)
Similarity:322/493 - (65%) Gaps:19/493 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 TSTELPPKTTECSDAPVELTGYRRWLSENLMLLVTLSGVLLGVILGLSLRPLNLHGDSIMLISYP 85
            |...|..|.|..:.:..::.|:   ...|..:::|::.|::|:|||..|||..:....:...|:|
Zfish    23 TERSLRAKNTVQNISSNDVKGF---FMRNAFVILTVAAVIVGIILGFGLRPYKMSYREVKYFSFP 84

  Fly    86 GELFMRVLKLMILPLVISSLIAGSASLNAKMNGKIALRTLVYFASTSFFNAALGIALVLLIHPGN 150
            |||.||:|::::|||::||||.|.|:|:::.:||:.:|.:||:.:|:.....:||.:||:||||.
Zfish    85 GELLMRMLQMLVLPLLVSSLITGMAALDSRASGKMGVRAVVYYTTTTIIAVFIGIVMVLIIHPGK 149

  Fly   151 PDLHNADDRSTDRRAVNLL---DSLLDLGRNVFPDNLFQASIQQAHTVYLPKPSILHVFNETMND 212
                .:.|..|....:..:   |:.|||.||:||.||.||..||..|.|..:...:.|.   :||
Zfish   150 ----GSKDEFTKHEKIEQVSPADAFLDLIRNMFPPNLVQACTQQFKTQYGKRVVTVKVL---VND 207

  Fly   213 TLAS-GSEAQRLSEDLTEDVVLVRDIQYRSGTNTLGIVFFCLVFGTFLGTIGQKGQVVVDFFAAI 276
            |:.| .:..|.|..   |:|:.|  :...:|.|.||:|.|.:.||..:|.:.::||.:.|||..:
Zfish   208 TVFSLNNGTQELKR---EEVIPV--LGTVNGINALGLVVFSMCFGLIIGNMKEQGQPLRDFFDCL 267

  Fly   277 FEVIMKMVTCVMWLTPVGISSVIAGKILSVGDLGLVMSQLMWFIVTVAIGVFIYQFVVMQAIYFV 341
            .|.||::|..:||..|:||..:|||||:.:.||..:..||..:.:||.||:.|:..:|:..:||:
Zfish   268 NEAIMRLVAIIMWYAPLGIMFLIAGKIVEMDDLSEMGGQLGMYTITVIIGLLIHAVIVLPLLYFL 332

  Fly   342 VVRRNPFKFYAGLIQAMLTAFATASTAAALPITFRCMNEKLKVDPRITRFVLPIGCNINMDGTAL 406
            |.|:|||.|.|||:||::||..|:|::|.|||||:|:.|...||.|:||||||:|..||||||||
Zfish   333 VTRKNPFVFIAGLLQALITALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTAL 397

  Fly   407 YIAVASIFIAQMSGMVLGFGELLTVLLTSTAASMSSASVPSAALVLLLVVLTAIDAPVQDVTLLF 471
            |.|:|:|||||::.|.:.|||:||:.:|:||||:.:|.:|.|.||.:::|||::..|..|:||:.
Zfish   398 YEALAAIFIAQVNDMEMNFGEILTISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLII 462

  Fly   472 AVDWFVDRIRTTNNMLGDCYTAAVVEELSRKELMALDA 509
            |||||:||:|||.|:|||...|.:||.|||.||.::||
Zfish   463 AVDWFLDRLRTTTNVLGDSIGAGIVEHLSRHELRSIDA 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat2NP_001162844.1 SDF 51..496 CDD:278787 196/448 (44%)
slc1a3aNP_997805.1 SDF 50..490 CDD:278787 198/451 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm25669
orthoMCL 1 0.900 - - OOG6_100309
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.830

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