DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eaat2 and glt-4

DIOPT Version :9

Sequence 1:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_509075.3 Gene:glt-4 / 188744 WormBaseID:WBGene00001622 Length:499 Species:Caenorhabditis elegans


Alignment Length:537 Identity:188/537 - (35%)
Similarity:302/537 - (56%) Gaps:56/537 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ENLMLLVTLSGVLLGVILGLSLRPLNLHGDS--IMLISYPGELFMRVLKLMILPLVISSLIAGSA 110
            |||:||.|:.||::|:.||.|||..:.....  :..:.:||:||:::||::|||:::||:|...|
 Worm     7 ENLLLLFTVLGVVVGIGLGFSLRDPSKAWSKRHLSYLRFPGDLFVQMLKMLILPMIMSSIITSLA 71

  Fly   111 SLNAKMNGKIALRTLVYFASTSFFNAALGIALVLLIHPGNPDLHNADDR----STDRRAVNLLDS 171
            ||::...|::.:.:::|:..|:||...|||.||.:|.||.....|.:|.    .|.......:|:
 Worm    72 SLDSGTAGRLGMVSMIYYTLTTFFAVFLGIVLVSVIKPGKWTTTNIEDLVGHVKTTPCVATAVDT 136

  Fly   172 LLDLGRNVFPDNLFQASIQQAHTVYLPKPSILHVFNETMN---DTLASGSEAQRLS-EDLTEDVV 232
            ::||.::.||:||.:|:.:.       :...|..||.|..   :...:.|..||.. .::.|.:|
 Worm   137 IIDLMKSCFPENLIEATFRS-------QKICLKFFNGTTEIPPEIAMTMSPEQRAQFTEVPEKIV 194

  Fly   233 LVRDIQYRSGTNTLGIVFFCLVFGTFLGTIGQKGQVVVDFFAAIFEVIMKMVTCVMWLTPVGISS 297
                   ..|.|.||:|.|.:..|..:|.||:.|:.:.:||.::....||::..|:..:||||:.
 Worm   195 -------SDGMNILGLVVFSVALGIVIGVIGEDGKPMKNFFKSLEACSMKLIGWVIIYSPVGITF 252

  Fly   298 VIAGKILSVGDLGLVMSQLMWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKFYAGLIQAMLTAF 362
            :||.:|:.:.|.|..:.:||.:::||.:|:.|:.|||:..:..|:.||||.||..|:.||:|||.
 Worm   253 LIAAQIVGMKDPGQELHRLMGYVITVILGLLIHAFVVIPLLCVVLARRNPIKFVGGMAQALLTAL 317

  Fly   363 ATASTAAALPITFRCMNEKLKVDPRITRFVLPIGCNINMDGTALYIAVASIFIAQMSGMVLGFGE 427
            ||:|::|.||::.:|..|..|||||:||||||:|..|||||||||.|||:|:|:|..|..|..||
 Worm   318 ATSSSSATLPLSIKCCEENNKVDPRVTRFVLPLGATINMDGTALYEAVAAIYISQCYGNDLSLGE 382

  Fly   428 LLTVLLTSTAASMSSASVPSAALVLLLVVLTAIDAPVQDVTLLFAVDWFVDRIRTTNNMLGDCYT 492
            ::.|.||:|.||:.:|.:|.|.:|.:::||.||..|.....|:|.||:.:||:|||.|:.||...
 Worm   383 VVLVSLTATLASIGAAGIPQAGIVTMIMVLIAIGLPTNLFILIFPVDFMLDRLRTTVNVHGDSIA 447

  Fly   493 AAVVEELSRKELMALDAASVNYQDMPAGTPNGHGHGHGHHDGGLLEGQTELETSSKCVMTMTDSV 557
            .||:|.|...:|..                      .|||          |:|:.:....::.:.
 Worm   448 TAVIERLCEDQLQK----------------------GGHH----------LDTNDQGYSMLSTNA 480

  Fly   558 VVDISAVMNNVNLQQEH 574
            ..|...:....|.:..|
 Worm   481 SPDPKRITIGNNCENSH 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat2NP_001162844.1 SDF 51..496 CDD:278787 173/454 (38%)
glt-4NP_509075.3 SDF 10..454 CDD:278787 175/457 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100309
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

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