DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eaat2 and glt-6

DIOPT Version :9

Sequence 1:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_501210.3 Gene:glt-6 / 187623 WormBaseID:WBGene00001624 Length:542 Species:Caenorhabditis elegans


Alignment Length:517 Identity:207/517 - (40%)
Similarity:316/517 - (61%) Gaps:50/517 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ENLMLLVTLSGVLLGVILGLSLRPLNLHGDSIMLISYPGELFMRVLKLMILPLVISSLIAGSASL 112
            ||.:|::|:..|.|||:||..||||||..:::.||::|||:||:|||:|||||:.||||:..|.:
 Worm    15 ENTLLVMTMFSVFLGVVLGFGLRPLNLSQETLQLINFPGEIFMQVLKMMILPLIFSSLISALAQM 79

  Fly   113 NAKMNGKIALRTLVYFASTSFFNAALGIALVLLIHPGNPDLHNAD--DRSTDRRAVNLLDSLLDL 175
            :||.:|::...|::|:.||:.....|||.||.:||||:|.:...|  :..:|.. |:.||:.|||
 Worm    80 DAKESGQMGASTVLYYLSTAVLATILGIFLVTVIHPGDPSIKGTDISEAPSDGN-VSPLDTFLDL 143

  Fly   176 GRNVFPDNLFQASIQQAHTVYLP-KPSILHVFNETMNDTLASGSEAQRLSEDLTEDVVLVRDIQY 239
            .||:||:|:.||:.::..|.|:. :|.|     .:.|.|  ||            ::::.|.|..
 Worm   144 VRNMFPENIIQATFERMQTTYVAIRPKI-----ASKNGT--SG------------NIIVKRSIGM 189

  Fly   240 RSGTNTLGIVFFCLVFGTFLGTIGQKGQVVVDFFAAIFEVIMKMVTCVMWLTPVGISSVIAGKIL 304
            ..|.|.|||:.||..||..:..:|::.::|||||..:..|||:.|..:||..|:||:.:|.|.:|
 Worm   190 TKGMNILGIIVFCTGFGIVISQLGERARIVVDFFVILDAVIMRWVVTLMWFAPLGITCLICGNLL 254

  Fly   305 SVGDLGLVMSQLMWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKFYAGLIQAMLTAFATASTAA 369
            .:.|:..:.|.|..::.||..|:.::..:.:..:||.:.|.||...:.|:|||.:|||.|||..|
 Worm   255 ELDDISDIASVLALYVFTVCAGLILHTIITVPLMYFFITRENPLPIFKGMIQAAVTAFGTASGGA 319

  Fly   370 ALPITFRCMNEKLKVDPRITRFVLPIGCNINMDGTALYIAVASIFIAQMSGMVLGFGELLTVLLT 434
            .||::.:|:.:...||.||:|||||:|..|||||.|||.|||.|||||::.:.|...|:|||.:|
 Worm   320 TLPMSMQCLEDHCGVDRRISRFVLPLGSTINMDGNALYEAVAVIFIAQLNNVQLSLAEVLTVSIT 384

  Fly   435 STAASMSSASVPSAALVLLLVVLTAIDAPVQDVTLLFAVDWFVDRIRTTNNMLGDCYTAAVVEEL 499
            :|.||:...||| |.||.:|::|..:..||:||::||.|||.:||:||..|:|||.:.|::|:.|
 Worm   385 ATIASIGLGSVP-AGLVSILLILNTVGLPVRDVSMLFTVDWLLDRVRTAVNVLGDAFAASMVQHL 448

  Fly   500 SRKELMALDAASVNYQDMPAGTPNGHGHGHGHHDGGL-LEGQTEL----ETSSKCVMTMTDS 556
            .:|:|...||                     .||... |:|:.||    .||.:...||:::
 Worm   449 LQKKLDQADA---------------------RHDYKTELKGEIELLKSAATSRRPSFTMSEA 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat2NP_001162844.1 SDF 51..496 CDD:278787 189/447 (42%)
glt-6NP_501210.3 SDF 18..448 CDD:278787 190/450 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 392 1.000 Domainoid score I393
eggNOG 1 0.900 - - E1_COG1301
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 406 1.000 Inparanoid score I1074
Isobase 1 0.950 - 0 Normalized mean entropy S3077
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm14496
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.930

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