DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eaat2 and glt-5

DIOPT Version :9

Sequence 1:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_496094.1 Gene:glt-5 / 174530 WormBaseID:WBGene00001623 Length:491 Species:Caenorhabditis elegans


Alignment Length:486 Identity:197/486 - (40%)
Similarity:304/486 - (62%) Gaps:39/486 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 WLSENLMLLVTLSGVLLGVILGLSLRPLNLHGDSIMLISYPGELFMRVLKLMILPLVISSLIAGS 109
            ||::|::||:|::|:::|||:|..||..:...|.|..:.:||||||.:||.|:|||:.:|:::|.
 Worm    15 WLTKNMLLLMTMAGIVMGVIIGGVLRTADPSPDVIRYVGFPGELFMNMLKAMVLPLIAASIVSGL 79

  Fly   110 ASLNAKMNGKIALRTLVYFASTSFFNAALGIALVLLIHPGNPDLHN--ADDRSTDRRAVNLLDSL 172
            :.|:.|.:|::..|.::|:|.|:.....|||.:|.:|.||:|.:..  ..|:..:...|:.....
 Worm    80 SQLDGKTSGRLGSRAVMYYAITTTHAVILGIIVVSIIQPGDPTIKQKMGYDKEGEAANVSAAQKF 144

  Fly   173 LDLGRNVFPDNLFQASIQQAHTVYLPKPSILHVFNETMNDTLASGSEAQRLSEDLTEDVVLVRDI 237
            |||.||.||:|:.:|:..|..|.|:             |.|.::|:         |.:|:   ..
 Worm   145 LDLFRNAFPENIMRATFSQVQTNYI-------------NQTHSNGA---------THEVL---HT 184

  Fly   238 QYRSGTNTLGIVFFCLVFGTFLGTIGQKGQVVVDFFAAIFEVIMKMVTCVMWLTPVGISSVIAGK 302
            .|..|.|.|||:.||:|.|..:..||::.:.:.:.|.|:..||.:||..:|||.|:||.|:||.|
 Worm   185 GYVDGMNVLGIIVFCIVMGLVVSRIGEEAKALANLFHALDVVITRMVMLIMWLGPIGIPSLIAQK 249

  Fly   303 ILSVGDLGLVMSQLMWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKFYAGLIQAMLTAFATAST 367
            :|.|.||.|....|..|:.||.:|:.|..|:.:..|||:..|.||:.|..||.||::||..|:|:
 Worm   250 MLEVSDLWLTARMLGLFVFTVILGLAIQAFITLPLIYFIGTRHNPYTFLKGLGQAIMTALGTSSS 314

  Fly   368 AAALPITFRCMNEKLKVDPRITRFVLPIGCNINMDGTALYIAVASIFIAQMSGMVLGFGELLTVL 432
            ||:||:||||:| ||.:|||:|:||||:|..:||||||||.|.||||||||:|:.|..|:::||.
 Worm   315 AASLPVTFRCLN-KLGIDPRVTKFVLPVGAMVNMDGTALYEATASIFIAQMNGLELSIGQIVTVS 378

  Fly   433 LTSTAASMSSASVPSAALVLLLVVLTAIDAPVQDVTLLFAVDWFVDRIRTTNNMLGDCYTAAVVE 497
            :|:|.||:.:||:|||.||.:|:||||:..|..|::|:.|||||:||:||:.|::||......|.
 Worm   379 ITATLASIGAASIPSAGLVTMLIVLTALGLPANDISLILAVDWFLDRLRTSVNVIGDALGCGFVH 443

  Fly   498 ELSRKELMA-----------LDAASVNYQDM 517
            .:....|.|           ::|..||:.::
 Worm   444 HICADHLNADVAEAEKNHAVVEAHGVNFDEL 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat2NP_001162844.1 SDF 51..496 CDD:278787 188/446 (42%)
glt-5NP_496094.1 SDF 21..442 CDD:278787 188/446 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 392 1.000 Domainoid score I393
eggNOG 1 0.900 - - E1_COG1301
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 406 1.000 Inparanoid score I1074
Isobase 1 0.950 - 0 Normalized mean entropy S3077
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm14496
orthoMCL 1 0.900 - - OOG6_100309
Panther 1 1.100 - - LDO PTHR11958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.830

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