DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eaat2 and slc1a1

DIOPT Version :9

Sequence 1:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster
Sequence 2:XP_002934228.2 Gene:slc1a1 / 100498100 XenbaseID:XB-GENE-1011544 Length:529 Species:Xenopus tropicalis


Alignment Length:492 Identity:217/492 - (44%)
Similarity:310/492 - (63%) Gaps:45/492 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RRWLSENLMLLVTLSGVLLGVILGLSLRPL----NLHGDSIMLISYPGELFMRVLKLMILPLVIS 103
            :|.|..|.:|:.|:..|:||:.||:.:|..    ||  |.| ..::|||:.||:|||:||||::|
 Frog    12 KRILKNNWLLITTIVAVVLGIGLGVLVREYGKLSNL--DKI-YFAFPGEILMRMLKLIILPLIVS 73

  Fly   104 SLIAGSASLNAKMNGKIALRTLVYFASTSFFNAALGIALVLLIHPGNPDLHNADDRSTDRRAVNL 168
            |:|.|.|:|::.::|||.||.:||:..|:.....|||.||:.|.||.....:..||:.....|..
 Frog    74 SMITGVAALDSSVSGKIGLRAIVYYFCTTVIAVILGIVLVVSIKPGVSQSADEIDRTGSTPEVTT 138

  Fly   169 LDSLLDLGRNVFPDNLFQASIQQAHTVYLPKPSILHVFNETMNDTLASGSEAQRLSEDLTEDVVL 233
            :|:||||.||:||:||.||..||    |..|...|....|...::...|        :.|.|:.|
 Frog   139 VDALLDLLRNMFPENLVQACFQQ----YKTKREELKPSKEPDKNSTVEG--------NYTIDLAL 191

  Fly   234 --VRDIQ-----------YRSGTNTLGIVFFCLVFGTFLGTIGQKGQVVVDFFAAIFEVIMKMVT 285
              :.|.|           |..|.|.||::.||||||..:|.:|:||||:||||.|:.:..|::|.
 Frog   192 LALADQQNKSKEYKIVGLYTDGVNVLGLIVFCLVFGIVIGKMGEKGQVLVDFFNALNDATMQIVQ 256

  Fly   286 CVMWLTPVGISSVIAGKILSVGD------LGLVMSQLMWFIVTVAIGVFIYQFVVMQAIYFVVVR 344
            .:||..||||..:|||||:.|.|      |||.|:       ||..|:.|:..|::..||.::||
 Frog   257 IIMWYMPVGILFLIAGKIIEVNDWEIFRKLGLYMA-------TVLSGLAIHSIVILPLIYLIIVR 314

  Fly   345 RNPFKFYAGLIQAMLTAFATASTAAALPITFRCMNEKLKVDPRITRFVLPIGCNINMDGTALYIA 409
            :|||:|..|:.||:|||...:|::|.||:||||..||.:||.||||||||:|..|||||||||.|
 Frog   315 KNPFRFAMGMAQALLTALMISSSSATLPVTFRCAEEKNRVDKRITRFVLPVGATINMDGTALYEA 379

  Fly   410 VASIFIAQMSGMVLGFGELLTVLLTSTAASMSSASVPSAALVLLLVVLTAIDAPVQDVTLLFAVD 474
            ||::||||::.|.|..|:::|:.:|:||||:.:|.||.|.||.:::||:|:..|.:||||:.|||
 Frog   380 VAAVFIAQLNDMNLDVGQIVTISVTATAASVGAAGVPQAGLVTMVIVLSAVGLPAEDVTLIIAVD 444

  Fly   475 WFVDRIRTTNNMLGDCYTAAVVEELSRKELMALDAAS 511
            |.:||.||..|:|||.:...:||:||::||..:|..|
 Frog   445 WLLDRFRTMVNVLGDAFGTGIVEKLSKRELELMDVTS 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat2NP_001162844.1 SDF 51..496 CDD:278787 206/467 (44%)
slc1a1XP_002934228.2 SDF 20..469 CDD:395299 208/470 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm47952
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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