DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eaat2 and slc1a7

DIOPT Version :9

Sequence 1:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster
Sequence 2:XP_004914070.1 Gene:slc1a7 / 100497134 XenbaseID:XB-GENE-979919 Length:564 Species:Xenopus tropicalis


Alignment Length:558 Identity:201/558 - (36%)
Similarity:314/558 - (56%) Gaps:50/558 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 NLMLLVTLSGVLLGVILGLSLRPLNLHGDSIMLISYPGELFMRVLKLMILPLVISSLIAGSASLN 113
            |.:|::::..|::|.:||..||...|....|....:||||.||:||::|||||:|||::|.|:|:
 Frog    19 NGLLILSVLSVIVGCLLGFFLRTRRLTEQEISYFQFPGELLMRMLKMLILPLVVSSLMSGLAALD 83

  Fly   114 AKMNGKIALRTLVYFASTSFFNAALGIALVLLIHPGNPDLHNADDRSTDRRAVNLLDSLLDLGRN 178
            ||.:.::.:.|:.|:..|:|....:||.:|.:||||........::| .:..::..|:||||.||
 Frog    84 AKTSSRLGIFTIAYYLWTTFVAVIVGIIMVSIIHPGGAAQKETTEQS-GKPVMSSADALLDLIRN 147

  Fly   179 VFPDNLFQASIQQAHTVYLPKPSILHVF-NETMNDTLA-------SGSEAQRLSEDLTEDVVLVR 235
            :||.||.:|:.:|..|..:|.......| :|:....:.       :||..|..:.|:|..    .
 Frog   148 MFPSNLVEATFKQYRTKNVPVMKPARAFPSESFTHRIVIYGIQDENGSHIQNFALDITPS----P 208

  Fly   236 DIQYRS------GTNTLGIVFFCLVFGTFLGTIGQKGQVVVDFFAAIFEVIMKMVTCVMWLTPVG 294
            |:.|:|      |.|.||||.|....|..||.:|..|..:|.|...:.|.:||:|...:|..|.|
 Frog   209 DVIYKSEPGTSEGMNVLGIVIFSATMGIMLGRMGTSGVPLVSFCQCLNESVMKIVAVAVWYFPFG 273

  Fly   295 ISSVIAGKILSVGDLGLVMSQLMWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKFYAGLIQAML 359
            |..:||||||.:.|...:..:|.::.:||..|:.::...::..:|.::.::||..|..|::||:|
 Frog   274 IVFLIAGKILEMDDPTAIGKKLGYYAITVLCGLVVHGLFILPLMYLLITKKNPIVFIRGVLQALL 338

  Fly   360 TAFATASTAAALPITFRCMNEKLKVDPRITRFVLPIGCNINMDGTALYIAVASIFIAQMSGMVLG 424
            .|.||:|::|.|||||:|:.|...:|.|:.|||||:|..|||||||||.|||:|||||::...|.
 Frog   339 IALATSSSSATLPITFKCLLENNHIDRRVARFVLPVGATINMDGTALYEAVAAIFIAQVNNYELD 403

  Fly   425 FGELLTVLLTSTAASMSSASVPSAALVLLLVVLTAIDAPVQDVTLLFAVDWFVDRIRTTNNMLGD 489
            ||:::|:.:|:||||:.:|.:|.|.||.:::|||::..|..|:||:.||||.:||.||..|:|||
 Frog   404 FGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWALDRFRTMINVLGD 468

  Fly   490 CYTAAVVEELSRKELMALDAASVNYQDMP--------------AGTPNGHGHGHG-------HHD 533
            ...|.::..:.||     |.|..|.:.:|              |...||....|.       ..:
 Frog   469 ALAAGIMAHICRK-----DFAKQNDEQVPLICETKPISLHQIMAYQRNGCVKSHSVPQFSPTPQE 528

  Fly   534 GGLLEGQTEL---ETSSKCVMTMTDSVVVDISAVMNNV 568
            ...::...|.   |||.:|  |..|...::||.:..||
 Frog   529 FQQMQEDPESAFPETSERC--TDKDHCTIEISELETNV 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat2NP_001162844.1 SDF 51..496 CDD:278787 179/458 (39%)
slc1a7XP_004914070.1 SDF 21..478 CDD:278787 179/461 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm47952
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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