DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eaat2 and slc1a2

DIOPT Version :9

Sequence 1:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster
Sequence 2:XP_004913402.1 Gene:slc1a2 / 100494868 XenbaseID:XB-GENE-1005169 Length:572 Species:Xenopus tropicalis


Alignment Length:524 Identity:220/524 - (41%)
Similarity:341/524 - (65%) Gaps:36/524 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 NLMLLVTLSGVLLGVILGLSLRPLN-LHGDSIMLISYPGELFMRVLKLMILPLVISSLIAGSASL 112
            ||:|.:|:.||::|.:.|..||..: :|.|.:|:|::||::.||:||::||||:|||||.|.|.|
 Frog    48 NLLLSLTVFGVIMGAVSGGLLRMASPIHPDIVMVIAFPGDILMRMLKMLILPLIISSLITGLAGL 112

  Fly   113 NAKMNGKIALRTLVYFASTSFFNAALGIALVLLIHPGNPDLHNADDRSTDRRAVNLLDSLLDLGR 177
            :||.:|::..|.::|:.||:...|.||:.|||.||||:|.|.....:..:...|:.||:.|||.|
 Frog   113 DAKSSGRLGTRAMIYYMSTTIIAAILGVILVLAIHPGDPKLKKQLGKGQENDEVSSLDAFLDLIR 177

  Fly   178 NVFPDNLFQASIQQAHTVYLPKPSILHVFNE-----------TMNDTLASGSEAQRLSEDLTEDV 231
            |:||:||.||..||..||  .|..::....|           .||||:|:.:|..|         
 Frog   178 NLFPENLVQACFQQIQTV--TKKVVVEAPTEEPSNVTDSVFALMNDTVATTTEEIR--------- 231

  Fly   232 VLVRDIQYRSGTNTLGIVFFCLVFGTFLGTIGQKGQVVVDFFAAIFEVIMKMVTCVMWLTPVGIS 296
               :.::::.|.|.||::.|.:.||..:|.:|::.:::|:||..:.|::||:||.:||.:|:||:
 Frog   232 ---KKLEFKDGMNVLGVIGFFIAFGIAMGKMGEQARLMVEFFNILNEIVMKLVTMIMWYSPLGIA 293

  Fly   297 SVIAGKILSVGDLGLVMSQLMWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKFYAGLIQAMLTA 361
            .:|.|||:::.||.||..||..::|||.:|:.|:..:.:..:|||:.|::||.|.||:.||.:||
 Frog   294 CLICGKIIAIKDLELVARQLGMYMVTVIVGLIIHGAIFLPLLYFVITRKSPFTFLAGVFQAWITA 358

  Fly   362 FATASTAAALPITFRCMNEKLKVDPRITRFVLPIGCNINMDGTALYIAVASIFIAQMSGMVLGFG 426
            ..|||:|..||:||||:.|.|.:|.|:||||||:|..|||||||||.|||:||||||:|::|..|
 Frog   359 LGTASSAGTLPVTFRCLEENLGIDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQMNGVILDGG 423

  Fly   427 ELLTVLLTSTAASMSSASVPSAALVLLLVVLTAIDAPVQDVTLLFAVDWFVDRIRTTNNMLGDCY 491
            :::||.||:|.||:.:||:|||.||.:|::|||:..|.||::||.||||.:||:||:.|::||.:
 Frog   424 QIITVSLTATLASVGAASIPSAGLVTMLLILTAVGLPTQDISLLVAVDWLLDRMRTSVNVVGDSF 488

  Fly   492 TAAVVEELSRKELMALDAASVNYQDMPAGTPNGHGHGHGHHDGGLLEGQTELETSSKCVMTMTDS 556
            .|.:|..||:.||.:||....:.:.....|.:.:.....|.:          ..|::|:....:|
 Frog   489 GAGIVYHLSKAELESLDKQHAHQEIEMTKTQSIYDDMKNHRE----------NNSNQCIYAAHNS 543

  Fly   557 VVVD 560
            |.||
 Frog   544 VPVD 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat2NP_001162844.1 SDF 51..496 CDD:278787 203/456 (45%)
slc1a2XP_004913402.1 SDF 50..496 CDD:366058 204/459 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 406 1.000 Domainoid score I698
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 429 1.000 Inparanoid score I1697
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm47952
Panther 1 1.100 - - O PTHR11958
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.160

Return to query results.
Submit another query.