DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eaat2 and slc1a3

DIOPT Version :9

Sequence 1:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_001106687.1 Gene:slc1a3 / 100127700 XenbaseID:XB-GENE-975313 Length:542 Species:Xenopus tropicalis


Alignment Length:479 Identity:202/479 - (42%)
Similarity:312/479 - (65%) Gaps:21/479 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 WLSENLMLLVTLSGVLLGVILGLSLRPLNLHGDSIMLISYPGELFMRVLKLMILPLVISSLIAGS 109
            :|..|..:|.|:..|::|:|||.|:|..::....|...|:||||.||:|::::|||::|||:.|.
 Frog    44 FLKRNGFVLFTVFAVIIGIILGFSVRKYHMTFREIKYFSFPGELLMRMLQMLVLPLIVSSLVTGM 108

  Fly   110 ASLNAKMNGKIALRTLVYFASTSFFNAALGIALVLLIHPG---NPDLHNADDRSTDRRAVNLLDS 171
            |:|::|.:||:.:|.:||:.:|:.....:||.:|::||||   ...:|    |......|...|:
 Frog   109 AALDSKASGKMGIRAVVYYMTTTVIAVFIGIIIVIIIHPGKGSKEKMH----REGKIEQVTAADA 169

  Fly   172 LLDLGRNVFPDNLFQASIQQAHTVY------LPKPSILHVFNETMNDTLASG-SEAQRLSEDLTE 229
            .:||.||:||.|:.:|..:|..|.|      :|.|.     ||::..::|:. |||........|
 Frog   170 FMDLIRNMFPPNMVEACFKQFKTNYEKKQFRVPIPE-----NESLLSSVANNVSEAMETLTKFRE 229

  Fly   230 DVVLVRDIQYRSGTNTLGIVFFCLVFGTFLGTIGQKGQVVVDFFAAIFEVIMKMVTCVMWLTPVG 294
            ::|.|....  :|.|.||:|.|.:.||..:|.:.::|:.:.|||.::.|.||::|..:||..|:|
 Frog   230 EIVPVAGSV--NGVNALGLVVFSMCFGLVIGNMKEQGKALKDFFDSLNEAIMRLVAVIMWYAPIG 292

  Fly   295 ISSVIAGKILSVGDLGLVMSQLMWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKFYAGLIQAML 359
            |..:|||||..:.|:|:|..||..:.:||.:|:.|:...|:..:||:|.|:||:.|..|||||::
 Frog   293 ILFLIAGKIAEMEDMGVVGGQLGMYTITVIVGLLIHAIFVLPLLYFLVTRKNPWVFIGGLIQALI 357

  Fly   360 TAFATASTAAALPITFRCMNEKLKVDPRITRFVLPIGCNINMDGTALYIAVASIFIAQMSGMVLG 424
            ||..|:|::|.|||||:|:.|...||.|:||||||:|..|||||||||.|:|:|||||::...|.
 Frog   358 TALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNYDLN 422

  Fly   425 FGELLTVLLTSTAASMSSASVPSAALVLLLVVLTAIDAPVQDVTLLFAVDWFVDRIRTTNNMLGD 489
            ||:::|:.:|:||||:.:|.:|.|.||.:::|||::..|.:|:||:.|||||:||:|||.|:|||
 Frog   423 FGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTTTNVLGD 487

  Fly   490 CYTAAVVEELSRKELMALDAASVN 513
            ...|.:||.|||.||...||...|
 Frog   488 SLGAGIVEHLSRHELKRGDAEMGN 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat2NP_001162844.1 SDF 51..496 CDD:278787 190/454 (42%)
slc1a3NP_001106687.1 SDF 50..497 CDD:366058 192/457 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm47952
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

Return to query results.
Submit another query.