DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eaat2 and slc1a4

DIOPT Version :10

Sequence 1:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_001096391.1 Gene:slc1a4 / 100124992 XenbaseID:XB-GENE-980499 Length:537 Species:Xenopus tropicalis


Alignment Length:512 Identity:182/512 - (35%)
Similarity:299/512 - (58%) Gaps:37/512 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MEKSGKFSDYLFAKMGPPTSTELPPKTTECSDAPVE--LTGYR--RWLSENLMLLVTLSGVLLGV 63
            |||..:.:.:: .:....|:.|:..|..|.|....:  ..|:|  ::|.:|.::::|:||||:||
 Frog     1 MEKQSETNGHI-TRYPDGTACEMDDKEPETSSPKKKKAAEGHRCAQFLKKNAIVILTVSGVLVGV 64

  Fly    64 ILGLSLRPLNLHGDSIMLISYPGELFMRVLKLMILPLVISSLIAGSASLNAKMNGKIALRTLVYF 128
            .||.::|.:||....:...::|||:.:|:||::|||||:.|||:|:|||:.:..||:....:.||
 Frog    65 GLGTAVRKMNLTKAQMSYFAFPGEMLLRMLKMIILPLVVCSLISGAASLDTRSLGKLGGIAVAYF 129

  Fly   129 ASTSFFNAALGIALVLLIHPG-------NPDLHNADDRSTDRRAVNLLDSLLDLGRNVFPDNLFQ 186
            ..|:...:.|.|||..:|.||       :.:|...:..||::..|   ||.|||.||:.|.||..
 Frog   130 LVTTLMASGLAIALGFIIKPGAGAGALNSNELGIEEALSTNKETV---DSFLDLARNLMPSNLVA 191

  Fly   187 ASIQQAHTVYLPKPSILHVFNETMNDTLASGSEAQRLSEDLTEDVVLVRDIQYRSGTNTLGIVFF 251
            |:.:...|.|       ..|.:...|.|            :||.|.:..:::   |.|.||:|.|
 Frog   192 AAFRSFATDY-------KTFTKNTTDGL------------ITEKVPIGTEVE---GMNILGLVLF 234

  Fly   252 CLVFGTFLGTIGQKGQVVVDFFAAIFEVIMKMVTCVMWLTPVGISSVIAGKILSVGDLGLVMSQL 316
            .||.|..|..:|.:|:.::.||.|..|..|.:|:.:||..|:||..::..||:.:|::.|:::.|
 Frog   235 ALVLGVALKKLGPEGEELIRFFNAFNEATMVLVSWIMWYVPIGIMFLVGSKIVEMGNIVLLVTSL 299

  Fly   317 MWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKFYAGLIQAMLTAFATASTAAALPITFRCMNEK 381
            ..:|:...:|..|:..:|:..|||...|:||:.|..|||....|||||:|::|.||...:|:.|.
 Frog   300 GKYIMASILGHVIHGGIVLPLIYFAFTRKNPYTFLLGLITPFATAFATSSSSATLPTMIKCIEEN 364

  Fly   382 LKVDPRITRFVLPIGCNINMDGTALYIAVASIFIAQMSGMVLGFGELLTVLLTSTAASMSSASVP 446
            ..||.||:||:||||..:||||.|::..:|::|||||:...|..|::.|:|:|:||:|:.:|.:|
 Frog   365 NGVDKRISRFILPIGATVNMDGAAIFQCMAAVFIAQMNSAELNAGQIFTILVTATASSVGAAGIP 429

  Fly   447 SAALVLLLVVLTAIDAPVQDVTLLFAVDWFVDRIRTTNNMLGDCYTAAVVEELSRKE 503
            :..::.:.::|.||..|..|::|:.||||.|||..|..|:.||...|.::..|::||
 Frog   430 AGGVLTIAIILEAIGLPTNDLSLILAVDWIVDRTTTVVNVEGDALGAGILHHLNQKE 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat2NP_001162844.1 SDF 51..499 CDD:425646 167/454 (37%)
slc1a4NP_001096391.1 GltP 48..476 CDD:440912 167/452 (37%)

Return to query results.
Submit another query.