DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eaat2 and slc1a4

DIOPT Version :9

Sequence 1:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster
Sequence 2:NP_001096391.1 Gene:slc1a4 / 100124992 XenbaseID:XB-GENE-980499 Length:537 Species:Xenopus tropicalis


Alignment Length:512 Identity:182/512 - (35%)
Similarity:299/512 - (58%) Gaps:37/512 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MEKSGKFSDYLFAKMGPPTSTELPPKTTECSDAPVE--LTGYR--RWLSENLMLLVTLSGVLLGV 63
            |||..:.:.:: .:....|:.|:..|..|.|....:  ..|:|  ::|.:|.::::|:||||:||
 Frog     1 MEKQSETNGHI-TRYPDGTACEMDDKEPETSSPKKKKAAEGHRCAQFLKKNAIVILTVSGVLVGV 64

  Fly    64 ILGLSLRPLNLHGDSIMLISYPGELFMRVLKLMILPLVISSLIAGSASLNAKMNGKIALRTLVYF 128
            .||.::|.:||....:...::|||:.:|:||::|||||:.|||:|:|||:.:..||:....:.||
 Frog    65 GLGTAVRKMNLTKAQMSYFAFPGEMLLRMLKMIILPLVVCSLISGAASLDTRSLGKLGGIAVAYF 129

  Fly   129 ASTSFFNAALGIALVLLIHPG-------NPDLHNADDRSTDRRAVNLLDSLLDLGRNVFPDNLFQ 186
            ..|:...:.|.|||..:|.||       :.:|...:..||::..|   ||.|||.||:.|.||..
 Frog   130 LVTTLMASGLAIALGFIIKPGAGAGALNSNELGIEEALSTNKETV---DSFLDLARNLMPSNLVA 191

  Fly   187 ASIQQAHTVYLPKPSILHVFNETMNDTLASGSEAQRLSEDLTEDVVLVRDIQYRSGTNTLGIVFF 251
            |:.:...|.|       ..|.:...|.|            :||.|.:..:::   |.|.||:|.|
 Frog   192 AAFRSFATDY-------KTFTKNTTDGL------------ITEKVPIGTEVE---GMNILGLVLF 234

  Fly   252 CLVFGTFLGTIGQKGQVVVDFFAAIFEVIMKMVTCVMWLTPVGISSVIAGKILSVGDLGLVMSQL 316
            .||.|..|..:|.:|:.::.||.|..|..|.:|:.:||..|:||..::..||:.:|::.|:::.|
 Frog   235 ALVLGVALKKLGPEGEELIRFFNAFNEATMVLVSWIMWYVPIGIMFLVGSKIVEMGNIVLLVTSL 299

  Fly   317 MWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKFYAGLIQAMLTAFATASTAAALPITFRCMNEK 381
            ..:|:...:|..|:..:|:..|||...|:||:.|..|||....|||||:|::|.||...:|:.|.
 Frog   300 GKYIMASILGHVIHGGIVLPLIYFAFTRKNPYTFLLGLITPFATAFATSSSSATLPTMIKCIEEN 364

  Fly   382 LKVDPRITRFVLPIGCNINMDGTALYIAVASIFIAQMSGMVLGFGELLTVLLTSTAASMSSASVP 446
            ..||.||:||:||||..:||||.|::..:|::|||||:...|..|::.|:|:|:||:|:.:|.:|
 Frog   365 NGVDKRISRFILPIGATVNMDGAAIFQCMAAVFIAQMNSAELNAGQIFTILVTATASSVGAAGIP 429

  Fly   447 SAALVLLLVVLTAIDAPVQDVTLLFAVDWFVDRIRTTNNMLGDCYTAAVVEELSRKE 503
            :..::.:.::|.||..|..|::|:.||||.|||..|..|:.||...|.::..|::||
 Frog   430 AGGVLTIAIILEAIGLPTNDLSLILAVDWIVDRTTTVVNVEGDALGAGILHHLNQKE 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat2NP_001162844.1 SDF 51..496 CDD:278787 167/451 (37%)
slc1a4NP_001096391.1 SDF 52..482 CDD:278787 167/454 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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