DRSC/TRiP Functional Genomics Resources

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Protein Alignment ds and PCDHB9

DIOPT Version :10

Sequence 1:NP_523446.2 Gene:ds / 33245 FlyBaseID:FBgn0284247 Length:3556 Species:Drosophila melanogaster
Sequence 2:NP_061992.3 Gene:PCDHB9 / 56127 HGNCID:8694 Length:797 Species:Homo sapiens


Alignment Length:742 Identity:213/742 - (28%)
Similarity:318/742 - (42%) Gaps:173/742 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 LAIDRATGEIRTKVKLDRETRAS-------YSLVAIPLSGRNIRVLVTVKDENDNAPTFPQTSMH 180
            |.:|..||.:.|..|||||....       |..:.:....:..|..:.|:|.||::|.|....|.
Human    75 LLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDD
PFQIYRAELRVRDINDHSPVFRHKEMV 139

  Fly   181 IEFPENTPREVKRTLLPARDLDLEPYNT-QRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFL 244
            ::..|||.......|..|:|.| |.:|: |.|.|.|   |..|.:......:|::|.:|.:...|
Human   140 LKISENTAEGTAFRLERAQDPD-EGHNSIQNYTISS---NSFFHIKISGSDEGMIYPELVLDKAL 200

  Fly   245 DRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVY 309
            |||.....||.:.|||||:|...|..|:.|.:.|||||.|.|.|:.|....|||:.||:.:::|.
Human   201 DREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDN
VPQFAQALYETQAPENSPVGSLIVKVS 265

  Fly   310 ASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLE 374
            |.|.|:..|..|.|:......|....|:|:|.:|.|::.:.||:|....:::.:.|.|.|  .|.
Human   266 AGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGG--GLS 328

  Fly   375 TTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNG 439
            ....|.|:|.|.|||.|.:.:..||:    .::|:: ||..:|...:.|.||            |
Human   329 ARCTVLIKVLDSNDN
PPELIISSLSN----SVAENS-PGIVLAVFKIKDRDS------------G 376

  Fly   440 GDGHFALTTRDN----------SIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRI 494
            .:|......:||          :.|:::....||||..:.|.:::..||.|||.|....||.|::
Human   377 ENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQV 441

  Fly   495 TDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQ 559
            :|||||.|.|.|..|...|.|...|...:..|.|.|||.|.|:.:||||            :.||
Human   442 SDVNDNAP
AFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL------------LPPQ 494

  Fly   560 TGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENE 624
            .                |.|          ||:|    ||:|:                  |:| 
Human   495 D----------------PHL----------PLAS----LVSIN------------------ADN- 510

  Fly   625 PVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLA 689
                                          .||  |.:||          ||:|...:::|.|.|
Human   511 ------------------------------GHL--FALRS----------LDYEALQAFDFRVGA 533

  Fly   690 TDRG--GLSTTAMIKMQLTDVNDNRP-VFYPREYKVSLRESPKASSQASSTPIV----------- 740
            :|||  .||:.|::::.:.|.|||.| |.||.:           :..|..|.:|           
Human   534 SDRGSPALSSEALVRVLVLDANDN
SPFVLYPLQ-----------NGSAPCTELVPRAAEPGYLVT 587

  Fly   741 AVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGNL 805
            .|||.|.|.|....:||:::...|.|:|.:....||:...|  :||.|....|.|.:...|.|..
Human   588 KVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTAR--LLSERDAAKHRLVVLVKDNGEP 650

  Fly   806 RSNADAVVFLSIIDAMQRP--PIFEKA 830
            ..:|.|.:.:.::|...:|  |:.|.|
Human   651 PRSATATLHVLLVDGFSQPYLPLPEAA 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsNP_523446.2 CA 111..172 CDD:214520 16/55 (29%)
Cadherin_repeat 178..282 CDD:206637 37/104 (36%)
Cadherin_repeat 291..389 CDD:206637 31/97 (32%)
Cadherin_repeat 406..500 CDD:206637 29/103 (28%)
Cadherin_repeat 509..607 CDD:206637 25/97 (26%)
Cadherin_repeat 616..711 CDD:206637 21/96 (22%)
Cadherin_repeat 719..820 CDD:206637 26/111 (23%)
Cadherin_repeat 832..927 CDD:206637
Cadherin_repeat 937..1032 CDD:206637
Cadherin_repeat 1040..1149 CDD:206637
Cadherin_repeat 1158..1252 CDD:206637
Cadherin_repeat 1263..1361 CDD:206637
Cadherin_repeat 1369..1481 CDD:206637
Cadherin_repeat 1489..1598 CDD:206637
Cadherin_repeat 1614..1710 CDD:206637
Cadherin_repeat 1723..1843 CDD:206637
Cadherin_repeat 1853..1948 CDD:206637
Cadherin_repeat 1957..2053 CDD:206637
Cadherin_repeat 2061..2154 CDD:206637
CA_like 2171..>2232 CDD:481204
Cadherin_repeat 2326..2424 CDD:206637
Cadherin_repeat 2434..2528 CDD:206637
Cadherin_repeat 2549..2641 CDD:206637
Cadherin_repeat 2652..2748 CDD:206637
Cadherin_repeat 2758..2858 CDD:206637
Cadherin_repeat 2866..2960 CDD:206637
Cadherin_repeat 2985..3071 CDD:206637
PCDHB9NP_061992.3 Cadherin_2 31..112 CDD:462413 11/36 (31%)
Cadherin_repeat 137..238 CDD:206637 37/104 (36%)
Cadherin_repeat 247..343 CDD:206637 31/97 (32%)
CA 372..449 CDD:214520 27/88 (31%)
Cadherin_repeat 455..557 CDD:206637 46/204 (23%)
Cadherin_repeat 576..664 CDD:206637 24/89 (27%)
Cadherin_C_2 686..768 CDD:465139
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 777..797
Blue background indicates that the domain is not in the aligned region.

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