DRSC/TRiP Functional Genomics Resources

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Protein Alignment ds and celsr1b

DIOPT Version :9

Sequence 1:NP_001285551.1 Gene:ds / 33245 FlyBaseID:FBgn0284247 Length:3556 Species:Drosophila melanogaster
Sequence 2:XP_001920772.2 Gene:celsr1b / 556520 ZFINID:ZDB-GENE-050823-4 Length:3006 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsNP_001285551.1 CA 111..172 CDD:214520
Cadherin_repeat 178..282 CDD:206637
Cadherin_repeat 291..389 CDD:206637
Cadherin_repeat 406..500 CDD:206637
Cadherin_repeat 509..607 CDD:206637
Cadherin_repeat 616..711 CDD:206637
Cadherin_repeat 719..820 CDD:206637
Cadherin_repeat 832..927 CDD:206637
Cadherin_repeat 937..1032 CDD:206637
Cadherin_repeat 1040..1149 CDD:206637
Cadherin_repeat 1158..1252 CDD:206637
Cadherin_repeat 1263..1361 CDD:206637
Cadherin_repeat 1369..1481 CDD:206637
Cadherin_repeat 1489..1598 CDD:206637
Cadherin_repeat 1614..1710 CDD:206637
Cadherin_repeat 1723..1843 CDD:206637
Cadherin_repeat 1853..1948 CDD:206637
Cadherin_repeat 1957..2053 CDD:206637
Cadherin_repeat 2061..2154 CDD:206637
Cadherin_repeat 2170..2318 CDD:206637
Cadherin_repeat 2326..2424 CDD:206637
Cadherin_repeat 2434..2528 CDD:206637
Cadherin_repeat 2549..2641 CDD:206637
Cadherin_repeat 2652..2748 CDD:206637
Cadherin_repeat 2758..2858 CDD:206637
Cadherin_repeat 2866..2960 CDD:206637
Cadherin_repeat 2985..3071 CDD:206637
celsr1bXP_001920772.2 Cadherin_repeat 244..343 CDD:206637
Cadherin_repeat 351..451 CDD:206637
Cadherin_repeat 460..557 CDD:206637
Cadherin_repeat 565..662 CDD:206637
COG1361 647..1132 CDD:224280
Cadherin_repeat 671..764 CDD:206637
Cadherin_repeat 773..867 CDD:206637
Cadherin_repeat 875..973 CDD:206637
Cadherin_repeat 981..1075 CDD:206637
Cadherin_repeat 1098..1176 CDD:206637
EGF_CA 1342..1377 CDD:238011
EGF_CA 1387..1419 CDD:214542
LamG 1422..1605 CDD:238058
EGF_CA 1629..1663 CDD:238011
Laminin_G_2 1697..1827 CDD:280389
EGF_CA 1852..1886 CDD:238011
EGF 1889..1922 CDD:278437
Laminin_EGF <1912..1946 CDD:278482
Laminin_EGF 1944..>1978 CDD:278482
EGF_Lam 1980..>2018 CDD:238012
HormR 2030..2091 CDD:214468
GAIN 2109..2357 CDD:293098
GPS 2387..2432 CDD:280071
7tm_2 2444..2674 CDD:278432
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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