DRSC/TRiP Functional Genomics Resources

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Protein Alignment ds and Cad89D

DIOPT Version :9

Sequence 1:NP_001285551.1 Gene:ds / 33245 FlyBaseID:FBgn0284247 Length:3556 Species:Drosophila melanogaster
Sequence 2:NP_650554.3 Gene:Cad89D / 42006 FlyBaseID:FBgn0038439 Length:2240 Species:Drosophila melanogaster


Alignment Length:2798 Identity:609/2798 - (21%)
Similarity:1007/2798 - (35%) Gaps:844/2798 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   932 EASMVR-ISVPESAELGAPLYAAHAHD------KDSGSSGQVTY-SLVKESGKGLFAIDARSGHL 988
            |:..|| |.:.|.|::|..:....|:.      |.:.:||...| :|.:.:...|....|||...
  Fly    69 ESEGVRFIRLREDAQVGKEILRLQAYPRSTAALKGADASGDHKYFNLTEHNATTLVVSLARSLER 133

  Fly   989 ILSQHLDYESSQRHTL---IVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRS 1050
            ::.:.:     .|:.|   |:.|.........:.|:|.|.::|||||.|.|....|.|:|.|:.|
  Fly   134 LVDRDV-----PRNLLKFRILCAGKQEKLEEGSYLSITVYIEDVNDNAPEFLNVPYVVDVDENTS 193

  Fly  1051 INAQIIQ-VNASDLDTGN--NARITYRIVDAGVDNVTNSISSSDVSQHFGI-FPNSGWIYLRAPL 1111
            |.:.|.: |.|.|.|..|  |:.:.:     .:..|...: |:|.|.:|.: .|:...:.|:..|
  Fly   194 IESIIFEGVQAFDRDKPNTPNSEVHF-----SMSTVPEQL-SADGSPYFALKSPHRPLLILKREL 252

  Fly  1112 DRETRDR-YQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGV- 1174
            |.:...| ::|.:.|.|.||||..|.|.:.:.|.|.:|..|||.:..|..||.|..   .:.|| 
  Fly   253 DFDNGIRQFKLPIFAWDRGTPANQANTTITINVRDVDDLPPKFTEGVYRTRINEFY---PMTGVP 314

  Fly  1175 ----------VTASDLDLGENAAIRYSLLPINSS--FQVHPVTGEISTREPLDRELREL----YD 1223
                      :.|.|.| ..||::.|.::..|..  |:|:|..|.:..::.:|.|...|    :.
  Fly   315 IRIPLYFAPPIMAFDQD-SLNASLVYDIISGNERQLFRVNPHNGVMYLQKEIDLEEESLPGNTFV 378

  Fly  1224 LVVEARDQGTPVRSARVPVRIHVSDVNDNAPEI-ADPQEDVVSVREEQPPGTEVVRVRAVDRDHG 1287
            |.:|||.:..|::.|...:.:.|.|:|||.||. ||...  :|:.|..|.|..|::|.|||||.|
  Fly   379 LQLEARQKDNPLKKALARIEVEVLDLNDNVPEFEADYYN--ISIVENLPTGFSVLQVNAVDRDQG 441

  Fly  1288 QNASITYSIVKGRDSDGHGLFSIDPTSG--VIRTRVVLDHEERSIYRLGVAASDGGNP------- 1343
            :|:...|::|:.:|:  .|.|.||..:|  .:|...:||.|:|...:|.|.|.: .||       
  Fly   442 ENSEFLYNLVETKDA--AGAFRIDSRTGWITVRDDRLLDREQRRSIQLNVEALE-RNPSYLDDKH 503

  Fly  1344 ---PRETVRMLRVEVLDLNDNRPTFTSSSLV-FRVREDAALGHVVGSI---SPIERPADVVRNSV 1401
               |..:...:.:.:||.|||.|.|...:|. |:|..:|..|:|:|.:   .|.|.|        
  Fly   504 LKKPGPSKVQVEITLLDTNDNTPKFEHGNLYEFKVPINAPTGYVIGQVVAHDPDEGP-------- 560

  Fly  1402 EESFEDLRVTYTL-NPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQ 1465
                 :..:.|.| .|.....|  .|.:|..:|.:.|...|.|.     |:.:....|....||.
  Fly   561 -----NGHLLYELQRPKGSGYI--PFRLDNKNGTIYVGGPLRRG-----RIAVFVEATDQPTNPS 613

  Fly  1466 S---SAITVKIEV-ADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGD-LQYRLI 1525
            .   |...:.||| |.::|.|.::...|.:..|...||:||.:.....|....|  || :.|.|:
  Fly   614 ERRFSLAVITIEVYATIDDQAIDFVGAPYEFWVGANTPLGTSVGQVRTTLIYEG--GDEIMYDLL 676

  Fly  1526 RYFPQLNESQEQAMSLFRMDSLTGALSLQAPL--------DFEAVQEYLLIVQALDQSSNVTERL 1582
            ..:   :|...     |.::..:|.:::...|        .||||..||.   |....|.|..|.
  Fly   677 HTY---SEGVP-----FAIEERSGIITVIRELSEFKRKVYQFEAVANYLF---ANSSQSLVMSRS 730

  Fly  1583 QTSVTVRLRILDANDHAP-------HFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDED--SG 1638
            .:.:|......:.:|...       |.|  |....|.....:.:...:..:..|   |:|:  .|
  Fly   731 SSPLTTIASPAELSDEGVLITNLTIHIV--NKPEQKVPLRPVIEEINMNVIHFH---VEENVVGG 790

  Fly  1639 DNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSL 1703
            ..|||.|:      .|...:|::.|....:.| .|.:.::..|.||      :...:....||..
  Fly   791 IIGQLLYK------NGINLVNNELGTYREMPS-EPTSRNITMGSRF------RSRNRSRSSKSKR 842

  Fly  1704 NLHLIVQGSHNNPPRFL-----QAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVA 1763
            .|...:.|..|...|::     :.|.:.:|.|:                                
  Fly   843 RLPRRLVGDANIKLRYIIANQQEVVNKISITED-------------------------------- 875

  Fly  1764 NDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQST-LSSSAVRKQRSSDSIGDTSNGQH 1827
                      |.:.|....|||.|.||.|.|.|    ..|| |.|.|                  
  Fly   876 ----------GTLLTLTGLDREQQPSYELTVIV----EYSTGLVSGA------------------ 908

  Fly  1828 FDVATIYITVGDVNDNSPEFRPGSCYGLSVPEN----SEPGVIHTVVASDLDEGPNADLIYSITG 1888
             .:..:.|.|.|||||:|:|...:..|| :.||    :|..:.|.::..|.||||||:....:. 
  Fly   909 -GIYQVNIKVDDVNDNAPKFNALTYVGL-INENCVVGTELSMNHAILIQDADEGPNAEFRVQLQ- 970

  Fly  1889 GNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFK 1953
            |:..::|||:..:|..|                :.|...:..|..|..||....:..||   .||
  Fly   971 GDYSDEFSIEYVNGTSS----------------ENSTHHKMPSTTGAFNIFNLTDQWND---EFK 1016

  Fly  1954 LSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITTVGKLDREL 2018
            ..:          |.|:.:|.:             :.|::...::.:..|:.|       ||||.
  Fly  1017 YQE----------LHTTFMQTN-------------FKLSSGPYFRISYTGKRG-------LDREK 1051

  Fly  2019 QASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALD 2083
            |..||..::|.|.|..   |....:.:.|.|:|||.|:|||..........|:...|.:::..::
  Fly  1052 QQLYNLKIIAADTGGL---SGYAHLTVLVADVNDNAPMFERISVFKDSRLEIREYTTDMEIYFVE 1113

  Fly  2084 ADLG-----ANAEIVYSLNAENSAVSAKFRIN--PSTGALSASQSLASESGKLLHLEVVARDKGN 2141
            :..|     |.|.::.:....:...|.:|.::  .|.||               .|.||||.|  
  Fly  1114 SSSGMTAPQATAAMMLAPPPYHIPGSPRFNVDRERSVGA---------------GLGVVARAK-- 1161

  Fly  2142 PPQSSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSD-GRRQKVQFSFG 2205
               |...::..|..:.|             ...:.|::|.||::||:.|...| |:...:.:...
  Fly  1162 ---SRRRMVRALTTKCP-------------LFAIYEDTPVGTKVLQLSASDEDFGKNALLHYELQ 1210

  Fly  2206 AGNED-----------GI--LSLDSLSGEIRVNKPHLLDYDRFSTPSMSALSRGRALHYEEEIDE 2257
            ....:           |:  .::|.||||:.||.|            :||               
  Fly  1211 GEQVERTPGMPMLRVHGVKYFAIDKLSGELSVNYP------------LSA--------------- 1248

  Fly  2258 SSEEDPNNSTRSQRALTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKF 2322
                                         .|.::|.....|...|.....|...:.|.|:::|.|
  Fly  1249 -----------------------------NIEIMLNLTVTDIDGLKDSTCLRFTVMDVNNHAPTF 1284

  Fly  2323 SQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLD 2387
            .:..:.....||..|.:.:.|:.|.|.|.|.||.:.|.:.|.:  ..|.|:|| ||:::....||
  Fly  1285 KKSWYSFDTPEGEYKDSVLGQLTAIDMDFGENANITYTLSDSH--LPFTIKPA-SGVLKIGGQLD 1346

  Fly  2388 REIRDIYKLKIIATDEG--VPQMTGTATIRVQIVDVNDNQPTFPPNNLVTVSEATELGAVITSIS 2450
            ||::|.|..::||||..  :.:|:.:..:.|.::|:|||:|.|     :...:.|:....|.|::
  Fly  1347 RELKDKYSFQVIATDNAPVMQRMSSSVDVEVNVLDINDNRPEF-----IGYDDQTKAVKFIPSVA 1406

  Fly  2451 ANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHEAR 2515
                                          ||.....|.|..||                     
  Fly  1407 ------------------------------DRTLMLPVYKAYLD--------------------- 1420

  Fly  2516 TVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGN-NSKVIY 2579
                             .:.||..:...|.||                   |.|:.|| |..|:|
  Fly  1421 -----------------RSTQPGTFVRQLTAI-------------------DKDNVGNGNGLVLY 1449

  Fly  2580 II---EPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDY---FVRIIAKDAGKPALKSSTLLRVQA 2638
            .|   |.....|.:...:|.:| .:||    ::...||   .|.:||.|.|.|||.::.::.|..
  Fly  1450 SIRHQEMQAPLFQIDSRDGTIS-TISR----INGYNDYEHLNVSVIASDVGSPALSATAIVIVNL 1509

  Fly  2639 NDNG--------------SGRSQFLQNQYRAQISE--AAPLGSVVLQLG--------------QD 2673
            ....              :..:.|....|..:::|  .||:..:.|.|.              ::
  Fly  1510 QGQAVTDPPKSTPKPEPPANVTVFQHAYYEVKLTENNEAPIEVMRLNLSAGLNPENYRWSLWLEE 1574

  Fly  2674 ALDQSLAIIAGNEESAFELLQSKAIVL--VKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGI 2736
            .||::      :....|| ..:|.::|  :||.|||....|:||:                    
  Fly  1575 GLDET------DAHPPFE-YDAKNMLLYALKPFDREHISRYQLRI-------------------- 1612

  Fly  2737 SVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEH 2801
                             |:.:...|....|.:.|.:.                         ||.
  Fly  1613 -----------------RADRLSREARNYARVSYPVV-------------------------DER 1635

  Fly  2802 MFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELH--DENDNEPKF-- 2862
                  :.|:                                ||...|:.:|  |||||.|||  
  Fly  1636 ------IEGL--------------------------------SLNECRILVHIADENDNAPKFRG 1662

  Fly  2863 ---PLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVT 2924
               |:   |..|.::...|..|.|..|:|||:|...::.|.:...|:     ::|.:|..||.: 
  Fly  1663 NGQPI---VAVLPQSASFGYPVTRVEANDLDEGLNAEIRYRLLNEPA-----RLFGIDELSGNI- 1718

  Fly  2925 SAFVFDYEQRQR-YDMELLASD-MG---GKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVAL 2984
             ..:.:..:.:. |..::.|:| ||   |:...|.|.|.|.:.        .:..|.|:......
  Fly  1719 -RLLGELSRTEHIYGFDVKATDRMGADDGRSGIVNVFVYIINE--------AKQVRLVVAGMPVE 1774

  Fly  2985 PQGYVVGQVTATDSDSGPDGRVVYQLSAPHSH----------FKVNRSSGAVLIKRKLKLDGDGD 3039
            .:..:.|.:.|.....|.|.||  :|..|:|.          :.|:..:.:::...:|:   |..
  Fly  1775 VERRIEGLMEALSDAIGKDVRV--RLLEPYSGGLEPATNAYIYAVDPHTNSIMEMEQLQ---DAL 1834

  Fly  3040 GNLYMDGRDISLVISASSGRHNSLSSMAVVEIA-LDPLAHPGTNLASAGGSSSGSIG--DWAIGL 3101
            ..|.:|...:... ....|:    ....::|:| ...||.|      |..|:|..:|  ::...:
  Fly  1835 AGLQLDALQLQQQ-KLDGGK----PMPRILELAEFGQLARP------AHASASSFMGGLEFVTVV 1888

  Fly  3102 LVAFLLVLCAAAGIFLFIHMRSRKPRNAVKPHLATDNAGVGNTNSYVDPSAFDTIPIRGSISGGA 3166
            |:| |:.|.|......::.||.::...:.:...|:| ||:..|                 |:|  
  Fly  1889 LLA-LISLGALIAACCYVCMRQKRRLWSQRDFSASD-AGLTYT-----------------IAG-- 1932

  Fly  3167 AGAASGQFAPPKYDEIPPFGAHAGSSGAATTSELSGSEQSGSSGRGSAEDDGEDEEIRMINEGPL 3231
            .|:..||....:..:........||:|:...:.....|...||.:..:.....::     .|..|
  Fly  1933 IGSPRGQKQRRQRQQRHTQRCSKGSTGSQRPTSAFMPESVCSSAQTQSTATATEK-----LEQQL 1992

  Fly  3232 HHRNGGAGAGSDDGRISDISVQNTQEYLARLGIVDHDPSGAGGGASSMAGSSHPMHLYHDDDATA 3296
            ||.:......:.         |...:||                              ::.....
  Fly  1993 HHHHQQQAMATQ---------QQHHQYL------------------------------NEQQRQQ 2018

  Fly  3297 RSDITNLIYAKLNDVTGAGSEIGSSADDAGTTAGSIGTIGTAITHGHGVMSSYGEVPVPV----- 3356
            :.:..::...|            |.|..|..|:|..|.:|.            |..|..:     
  Fly  2019 KREYIDVPLPK------------SIAKAAAVTSGGDGAVGV------------GSTPFVLKYNAC 2059

  Fly  3357 -PVVVGGSNVGGSLSSI--VHSEEELTGSYNWDYLLDWGPQYQPLAHVFSEIARLKDDTLSEHSG 3418
             ||    :|:....:|:  :||    ||.       |.|.::..    ..|:.....|:. :|.|
  Fly  2060 QPV----NNLNNYETSLFSLHS----TGQ-------DSGVEFLS----SRELYETSPDSF-QHGG 2104

  Fly  3419 SGASSSAK---SKHSSSHSSAGAGSVVLKPPPSAPPTH-----IPPPLLTNVAPRAINLPMRLPP 3475
            |...::.:   .:|:.:|..      :.:|...:..|:     ...||:.:.. |:.|...|  .
  Fly  2105 SKRGNNTEVLCPRHAKAHLE------LRQPNTDSSDTYEDSLKTDEPLVAHNC-RSANCEHR--Q 2160

  Fly  3476 HLSLAPAHLPRSPIGHEASGSFSTSSAMSPSFSPSLSPLATRSPSISPLGAGPPTHLPHVSLPRH 3540
            | ...|:|.|     |..:..|...|.:..|||.....|..:||.|              ||...
  Fly  2161 H-QQHPSHHP-----HYQNTRFEKRSCVRHSFSGVKDDLMQQSPQI--------------SLRPR 2205

  Fly  3541 GHA 3543
            |||
  Fly  2206 GHA 2208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsNP_001285551.1 CA 111..172 CDD:214520
Cadherin_repeat 178..282 CDD:206637
Cadherin_repeat 291..389 CDD:206637
Cadherin_repeat 406..500 CDD:206637
Cadherin_repeat 509..607 CDD:206637
Cadherin_repeat 616..711 CDD:206637
Cadherin_repeat 719..820 CDD:206637
Cadherin_repeat 832..927 CDD:206637
Cadherin_repeat 937..1032 CDD:206637 25/105 (24%)
Cadherin_repeat 1040..1149 CDD:206637 34/113 (30%)
Cadherin_repeat 1158..1252 CDD:206637 29/110 (26%)
Cadherin_repeat 1263..1361 CDD:206637 35/109 (32%)
Cadherin_repeat 1369..1481 CDD:206637 29/120 (24%)
Cadherin_repeat 1489..1598 CDD:206637 27/117 (23%)
Cadherin_repeat 1614..1710 CDD:206637 19/97 (20%)
Cadherin_repeat 1723..1843 CDD:206637 24/120 (20%)
Cadherin_repeat 1853..1948 CDD:206637 25/98 (26%)
Cadherin_repeat 1957..2053 CDD:206637 20/95 (21%)
Cadherin_repeat 2061..2154 CDD:206637 17/99 (17%)
Cadherin_repeat 2170..2318 CDD:206637 27/161 (17%)
Cadherin_repeat 2326..2424 CDD:206637 32/99 (32%)
Cadherin_repeat 2434..2528 CDD:206637 9/93 (10%)
Cadherin_repeat 2549..2641 CDD:206637 25/98 (26%)
Cadherin_repeat 2652..2748 CDD:206637 20/113 (18%)
Cadherin_repeat 2758..2858 CDD:206637 13/101 (13%)
Cadherin_repeat 2866..2960 CDD:206637 25/98 (26%)
Cadherin_repeat 2985..3071 CDD:206637 15/95 (16%)
Cad89DNP_650554.3 Cadherin_repeat 183..290 CDD:206637 34/112 (30%)
Cadherin_repeat 325..407 CDD:206637 23/82 (28%)
Cadherin_repeat 416..524 CDD:206637 35/112 (31%)
Cadherin_repeat 534..626 CDD:206637 25/111 (23%)
Cadherin_repeat 641..>714 CDD:206637 19/82 (23%)
CA 851..925 CDD:214520 28/138 (20%)
CA 1026..1085 CDD:214520 20/81 (25%)
Cadherin_repeat 1177..1280 CDD:206637 27/158 (17%)
Cadherin_repeat 1289..1385 CDD:206637 32/98 (33%)
Cadherin_repeat 1414..1510 CDD:206637 34/157 (22%)
CA 1576..1658 CDD:214520 30/188 (16%)
Cadherin_repeat 1666..1760 CDD:206637 27/103 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449655
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24026
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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