DRSC/TRiP Functional Genomics Resources

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Protein Alignment ds and Cad87A

DIOPT Version :9

Sequence 1:NP_001285551.1 Gene:ds / 33245 FlyBaseID:FBgn0284247 Length:3556 Species:Drosophila melanogaster
Sequence 2:NP_731649.2 Gene:Cad87A / 41441 FlyBaseID:FBgn0037963 Length:1975 Species:Drosophila melanogaster


Alignment Length:1945 Identity:535/1945 - (27%)
Similarity:845/1945 - (43%) Gaps:362/1945 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 PIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEY-AINRRQSDKEQMFRIDPRTGAIYI 347
            |:|.|:.....:.||.||||.|.::.|.|   .|...|.| ||.      ...|.:||.:|.|.:
  Fly    25 PVFTQTLNNIILYENVTVGTVVFRLEAYD---PEGSPVTYGAIG------ADHFSVDPVSGNITL 80

  Fly   348 NKALDFETKELHELVVVAKD----HGEQPLETTAFVSIR--VTDVNDNQPTI-NVIFLSDDASPK 405
            .|.||.|.|:..:.:|..:|    .||...:....|.|.  :.|:|||.|.. |..:.:|     
  Fly    81 IKPLDREEKDTLKFLVSIRDRVDPEGESERDNVVEVPITFIILDLNDNPPEFQNTPYEAD----- 140

  Fly   406 ISESAQPGEFV-ARISVHD-------------PDSKTEYANVNVTLNGGDGHFALTTRDNSIYLV 456
            ::|.|..|..: .:|:|.|             |..::..|.....|:       :..||.:|   
  Fly   141 VNEDAAVGTTIFDKITVKDRDIVGESLDLKCLPQQQSPEACRKFRLH-------IIKRDATI--- 195

  Fly   457 IVHLPLDREIVSNYTLS----------VVATDKGTPPLHASKSIF-LRITDVNDNPPEFEQDLYH 510
                 |:..:|.|.||:          :.|||..    |.:::.| .|:.||.|.||.|:..|  
  Fly   196 -----LEAAVVLNDTLNYNQRMVYHFQIEATDGP----HKTQTTFEARVKDVQDKPPVFQGSL-- 249

  Fly   511 ANVMEVADP-GTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCE-- 572
            :.|::...| .|.||.|.|.|.|.|....:.|.|...|.   .:|.:|.|||.:.|...:|.|  
  Fly   250 STVIDEDSPINTLVLTVHARDGDTGEPRKIVYDLRTNPN---DYFLLDAQTGELRTAKPLDREAL 311

  Fly   573 --TEPVPQLTVVARD--GGVP---PL-SSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRC 629
              :..:..|.:.||:  .|||   || |:||...|||.||||:.|:|:...|:||:.||...|..
  Fly   312 EDSTGIISLVIRARELVNGVPSDDPLTSATAKATVTIRDVNDSPPVFNHKEYSVSLLENTLPGTP 376

  Fly   630 I-LKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASG----EICIA-GELDFERRSSYEFPVL 688
            : |.:|.||.|.|:|:.....: :....:.:.|.:..:|    .|.:| |.||:|..:..:|.||
  Fly   377 LALDMSVSDADVGINSKFALRL-DDVSGVFDVEPKLVTGYSQVNIRVANGTLDYENPNQRKFIVL 440

  Fly   689 A----TDRG-GLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPD 748
            .    ||.. .||:||.|.:.:.|.|||:|||....|..|:.|:......     |..:.|.|.|
  Fly   441 VVAEETDTNPRLSSTATITVSVLDANDNKPVFEQESYSASVSEAALPGQY-----IATITARDVD 500

  Fly   749 YGNFGQVSYRI-VAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGNLRSNADAV 812
            .|::|....|. ::|..|.:|.::..||.|.:                       .|...|.:: 
  Fly   501 SGSYGDSGIRYSLSGTGAELFHVNEQTGVISL-----------------------ANCHDNGES- 541

  Fly   813 VFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTV-VGSVIAASGDVAHRSPVRYSIYSGDPDGYFS 876
                  :..:|..:.|    :.:|:||...|.: :.|:.||:.::.....|:|::.:..|     
  Fly   542 ------NRRERRDLNE----DEHVEEDDGEGHLEMLSMEAATREIGTEPTVQYTLITQAP----- 591

  Fly   877 IETNSGNIRIAKP-----------------------LDHEAKSQVLLNIQAT----LGEPPVYGH 914
             |..:.::.:..|                       ||:|:::...|:.:||    .|...|   
  Fly   592 -EEQASSVPLPAPVPHAAPSGVPAATANDDKAPQTCLDYESETTYFLSYKATDDNGRGSASV--- 652

  Fly   915 TQVNIEVEDVNDNAPEFEASMVRISVPESAEL-GAPLYAAHAHDKDSGSSGQVTYSL-VKESGKG 977
            ..:.|.|.|.||:.|..|:.:.|.||.|.|.: .:|| ...|.|.|:.|  :::|.: ..|..:.
  Fly   653 VSLRISVTDANDSPPVCESPLYRASVDEGAVVFDSPL-IVKARDADTMS--RISYRIRGSEQVES 714

  Fly   978 LFAIDARSGHLILSQH--LDYESSQRHTLI--VTATDGGVPSLSTNLTILVDVQDVNDNPPVFEK 1038
            :|.||..:|.:|:..:  ||..:.....||  |.|.||   ..:.:..:.:.|:|||::.|.||:
  Fly   715 IFDIDRETGQIIIRPNATLDVTNLNSDQLIFAVEANDG---LFTAHCGVNITVRDVNNHVPNFEQ 776

  Fly  1039 DEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSG 1103
            ..||..|.|:..|...:.:|:|:|||||.||.:.|||.....|:             |||...:|
  Fly   777 QSYSAVVEENSEIGTSVERVHATDLDTGKNAELRYRIQQGSFDD-------------FGIVETTG 828

  Fly  1104 WIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRR 1168
            .:::...||.:.|:.|||.:.|:|.|||:......:.:.|.::||.||.|..:.....:..:...
  Fly   829 EVFVSRKLDFDRRNTYQLQIQASDQGTPSLTGTATLTINVQNSNDKDPYFVPATQHAEVRADAPP 893

  Fly  1169 GSVVGVVTASDLDLGENAAIRYS-------------LLPINSSFQVH---PVTGEISTREPLDRE 1217
            |.:|..:.|.|.|:..:.|:.::             .||....|:.:   ...|::|..:.|||.
  Fly   894 GQLVYTLIALDPDVANHNALEFAGTDDITAIDKEGKELPHYDQFKEYFKISRNGKVSVNKQLDRN 958

  Fly  1218 LRELYDLVVEARDQGTP-VRSARVPVRIHVSDVNDNAP------EIADPQEDVVSVREEQPPGTE 1275
            |..:..:.|...|...| |:..|..:.|.:.|||.|.|      .:..||..:..| ||||.||.
  Fly   959 LFAVMRINVLVTDSTAPNVQQGRGLLIIQIIDVNKNPPRFNAPWSVEQPQIKLQMV-EEQPVGTV 1022

  Fly  1276 VVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDG 1340
            :..::|.|.|.        ||.:...|| :..|:|:.|||:|.|...||:|.....:..|..||.
  Fly  1023 LTTLQANDEDS--------SIGEFNISD-NDYFAINQTSGMIYTIARLDYEVVKEVKFQVTVSDT 1078

  Fly  1341 GNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESF 1405
            |.|.......:.|::::||||.|.|:.|...|.|.|::..|.|.|.:...:....|..       
  Fly  1079 GVPALTATADVVVDIINLNDNDPKFSQSDYYFNVTENSPRGTVAGKVEAHDGDVGVFG------- 1136

  Fly  1406 EDLRVTYTL---NPLTKDLIEAAFDIDRHSGNLVVAR--LLDREVQSEFRLEIRALDTTASNNPQ 1465
               .:||||   |       ...|.||.::||::||.  :||||...|..|.:.|.|...:...:
  Fly  1137 ---EITYTLIGEN-------NKYFSIDAYTGNVMVANSSILDREQIKELTLSVVAQDKAPAAVQK 1191

  Fly  1466 SSAITVKIEVADVNDNAPEWPQDPIDLQVSEAT---PVGTIIHNFTATDADTGTNGDLQYRLIRY 1527
            |:..|:.|.:.|||||||.:.:|..:..|:|..   |...:: ...|.|.|.|..||::|.:   
  Fly  1192 SATATIHINILDVNDNAPVFTRDVYNSTVAENAAYQPPAALL-QVQAIDQDEGLYGDVRYII--- 1252

  Fly  1528 FPQLNESQEQAMSLFRMDSLTG----ALSLQAPLDFEAVQEYLLIVQALD-QSSNVTERLQTSVT 1587
                  :....|.||::|:.:|    |.||.....     .|.|.:.|.| |.|...|....::.
  Fly  1253 ------TAGNEMGLFKLDAQSGIVYPAQSLSGKHG-----AYELTISARDTQGSGTMESTTKAII 1306

  Fly  1588 VRLRILDANDHAPHFVSPNSSGGKTASLFI-SDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGN 1651
            ..||:   |.|.|.||.|..|   .|::.| .|..:...::..:.|:|.|:.:||:::|.:...|
  Fly  1307 TVLRV---NRHKPEFVIPALS---NATIEIPGDIVQPDYLLLTVRAMDNDTEENGKVSYHLQVNN 1365

  Fly  1652 GE----GRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGS 1712
            ..    |.|:|:..||.:.....|     :.:....:::|:.|:|.|.| |.:|...|.:.:..:
  Fly  1366 RNEQQTGEFKIDEVTGELRAKTQL-----NRKNRANYDIILVARDAGNP-PFESLRLLSVSIVDA 1424

  Fly  1713 HNNPPRFLQA--VYRATILENVPSGSFV----LQVTAKSLHGAENANLSYEIPAGVANDLFHVDW 1771
            :.|.|.|..|  .|:.:|.||  ||..|    :|..::|.|   |.::.|.:..|..:..|:||.
  Fly  1425 NENRPEFPDASNPYKVSINEN--SGRDVKIGHIQAASRSKH---NRDIFYYMLLGNEDGAFYVDK 1484

  Fly  1772 QRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYIT 1836
            ..|.|.|....|||....|.|.:.   |:.::.|..|  .::|:|.|| .|.|..: .||.:.||
  Fly  1485 LTGDIYTNKSLDREETDVYTLYIL---ASIKADLHIS--EEERASFSI-KTLNRDN-TVAKVAIT 1542

  Fly  1837 VGDVNDNSPEF-RPGSCYGLSVPENSEPGVIHTVV-ASDLDEGPNADLIYSITGGNLGNKFSIDS 1899
            |.|||||.|.| :|  .|...|..|::.|...|:| |:|.|:|.||.:.:.|...|| .||....
  Fly  1543 VLDVNDNPPVFEKP--IYYAGVNANAKMGAAITLVNATDADQGKNAKIEFMIVASNL-YKFGATK 1604

  Fly  1900 SSGELSARPLDREQ--------------HSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAP 1950
            |:|.:...|....|              ..|:.|:|.|.:..||:| .....:.|:|.| .....
  Fly  1605 STGSIVPSPFAISQDGRISANTIMAEYNQDRFELEIVARELEQPQS-SASTKVNIWVFD-GTQLV 1667

  Fly  1951 RFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITTVGKLD 2015
            |..||:....|.::                   ...::..|.|.||.:..:|.....:.::|::.
  Fly  1668 RVILSRPPEEVYQE-------------------QEEIIAELRNATQHRIIVDEIRFHLDSIGRIR 1713

  Fly  2016 RELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIG-----QVPALI 2070
            .:....|   ..|.|....::    .||...:.||:.|....:.| |.|     .|||.|
  Fly  1714 MDWCDLY---FHAVDPQTQQI----APVDEILKDIDRNYDYLKDY-YAGFAIENVVPAYI 1765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsNP_001285551.1 CA 111..172 CDD:214520
Cadherin_repeat 178..282 CDD:206637
Cadherin_repeat 291..389 CDD:206637 32/104 (31%)
Cadherin_repeat 406..500 CDD:206637 25/118 (21%)
Cadherin_repeat 509..607 CDD:206637 38/108 (35%)
Cadherin_repeat 616..711 CDD:206637 33/105 (31%)
Cadherin_repeat 719..820 CDD:206637 18/101 (18%)
Cadherin_repeat 832..927 CDD:206637 24/122 (20%)
Cadherin_repeat 937..1032 CDD:206637 30/100 (30%)
Cadherin_repeat 1040..1149 CDD:206637 35/108 (32%)
Cadherin_repeat 1158..1252 CDD:206637 24/110 (22%)
Cadherin_repeat 1263..1361 CDD:206637 32/97 (33%)
Cadherin_repeat 1369..1481 CDD:206637 33/116 (28%)
Cadherin_repeat 1489..1598 CDD:206637 28/116 (24%)
Cadherin_repeat 1614..1710 CDD:206637 23/100 (23%)
Cadherin_repeat 1723..1843 CDD:206637 41/123 (33%)
Cadherin_repeat 1853..1948 CDD:206637 31/109 (28%)
Cadherin_repeat 1957..2053 CDD:206637 14/95 (15%)
Cadherin_repeat 2061..2154 CDD:206637 6/15 (40%)
Cadherin_repeat 2170..2318 CDD:206637
Cadherin_repeat 2326..2424 CDD:206637
Cadherin_repeat 2434..2528 CDD:206637
Cadherin_repeat 2549..2641 CDD:206637
Cadherin_repeat 2652..2748 CDD:206637
Cadherin_repeat 2758..2858 CDD:206637
Cadherin_repeat 2866..2960 CDD:206637
Cadherin_repeat 2985..3071 CDD:206637
Cad87ANP_731649.2 Cadherin_repeat 33..128 CDD:206637 32/103 (31%)
Cadherin_repeat 136..240 CDD:206637 26/127 (20%)
Cadherin_repeat 248..353 CDD:206637 38/109 (35%)
Cadherin_repeat 362..468 CDD:206637 33/106 (31%)
Cadherin_repeat 476..>533 CDD:206637 16/84 (19%)
E_set <627..667 CDD:298831 13/42 (31%)
CA 692..772 CDD:214520 23/84 (27%)
Cadherin_repeat 778..873 CDD:206637 34/107 (32%)
Cadherin_repeat 882..994 CDD:206637 24/111 (22%)
Cadherin_repeat 1015..1099 CDD:206637 31/92 (34%)
Cadherin_repeat 1108..1207 CDD:206637 33/115 (29%)
Cadherin_repeat 1215..1314 CDD:206637 28/116 (24%)
Cadherin_repeat 1327..1427 CDD:206637 23/105 (22%)
Cadherin_repeat 1437..1549 CDD:206637 41/123 (33%)
Cadherin_repeat 1557..1662 CDD:206637 30/106 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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