DRSC/TRiP Functional Genomics Resources

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Protein Alignment ds and Cad86C

DIOPT Version :9

Sequence 1:NP_001285551.1 Gene:ds / 33245 FlyBaseID:FBgn0284247 Length:3556 Species:Drosophila melanogaster
Sequence 2:NP_001247033.1 Gene:Cad86C / 41302 FlyBaseID:FBgn0261053 Length:1949 Species:Drosophila melanogaster


Alignment Length:2251 Identity:460/2251 - (20%)
Similarity:743/2251 - (33%) Gaps:698/2251 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   583 ARDGGVPPL--SSTATVLVTI---------HDVNDNEPIFDQS--FYNVSVAENEPVGRCILKVS 634
            :|.|.:.|.  :.||..|:||         |.|...:|.||.:  ...|.|..:..|...|.::.
  Fly   103 SRLGPIGPWLGAMTAYRLLTISLLIGILCPHHVQGADPKFDPTTRMRLVLVPADAQVNSVIYRLR 167

  Fly   635 ASDPDCGVNAMVNYTIGEGFKHLTEFEV---RSAS------------GEICIAGELDFERRSS-- 682
            |:|              |.|.:...||.   .|||            ..:|.| .:..:||..  
  Fly   168 ATD--------------EEFDYPLTFEFVGDASASTVKVESLPCTKYNSVCQA-NIVLQRRLEPG 217

  Fly   683 --YEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVAT 745
              |:|.|...|..|..||.:..:..|:......:.:|.:                  |.:.::..
  Fly   218 RYYDFQVSVKDTKGGMTTQLCSITATNFTTPHDLIFPHK------------------PGIIMIPE 264

  Fly   746 DPDYGNFGQVSYRIVAGNE------------AGIFRI-------DRSTGEIFVVRPDMLSVRTQP 791
            |...|.  ::.|.|...|.            :.:|.|       :.:.|.:|::.|  |....|.
  Fly   265 DAKRGT--ELDYVIARKNPLFQKPVYLELWGSPLFAIRQKIVSSETTEGTVFLLGP--LDFEKQA 325

  Fly   792 MHMLNISATD-----GGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIA 851
            |:.|.|.|.|     |.:.|:.|...:.:.:.|...:||:|..|.....:...|..|..:..|.|
  Fly   326 MYHLTILANDAYAEPGQDSRNIAGMEIVVIVQDVQDQPPVFTSAPPVTKLPPGILPGDKILQVHA 390

  Fly   852 ASGDVAHRSPVRYSIYS-GDP-DGYFSIETNSGNIRIAKPLDHEA-----KSQVLLNI---QATL 906
            ..||..:...|||.:.| .:| ..:|.|...||.|.:.:||:..|     ...|||.:   :..:
  Fly   391 EDGDKGNPREVRYGLVSENNPFTSFFDINETSGEIFLMRPLEDIAFITHVGDPVLLTVIAEEVKV 455

  Fly   907 G--EPPVYGHT-QVNIEVEDVNDNAPEFEASMVRISVPESAELGAPL-----YAAHAHDKDSGSS 963
            |  |||....| |:...:.|..::.|.||.......|.|:|..|..|     |....:|.|:|.:
  Fly   456 GRDEPPALASTVQLAFFLPDRTNSPPYFENDHYVSRVDENAPHGTALTFVDPYVPRVYDDDTGKN 520

  Fly   964 GQVTYSLVKESGKGLFAI-----DARSGHLIL---SQHLDYESSQRHTLIVTATDGGVPSLSTNL 1020
            |  .:||...:..|.|.|     :..:|.||.   :..||||..|.....:.|.:.|.   :|||
  Fly   521 G--VFSLTLLNNNGTFEISPNVAERSAGFLIRVRDNSMLDYEQQQSVQFQILAQELGP---ATNL 580

  Fly  1021 TILVDV----QDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIV----- 1076
            :.||:|    .|||||.||||:..|||.:.|:.:...:::||.|:|.|:|...::.|..:     
  Fly   581 SALVNVTVYINDVNDNAPVFEQPAYSVELPENMTAGTKVVQVLATDPDSGLGGKVRYTAILGYLN 645

  Fly  1077 -DAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVI 1140
             ...:|..|..|:.|.....|               |||....|.|.|.|.|.......|:..:|
  Fly   646 TSLNLDAETGLITVSTNKHGF---------------DREVMPEYHLYVEARDMDGEGNRAQVPLI 695

  Fly  1141 VRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLD-LGENAAIRYSLLPIN--SSFQVH 1202
            ::::|.||..|.|.|..|||.:..:|...:...|:.|.|.| ...|..:||.::..|  :.|.:.
  Fly   696 IKLIDVNDETPIFDKDLYEFILTHDLMGFTTTAVIHAEDKDATAPNNEVRYEIINGNYDNQFVLD 760

  Fly  1203 PVTGEISTREPL------------------DRELRELYDLVVEARDQGTPVRSARVPVRIHVSDV 1249
            .||||::.||.:                  |.|..:::.|...|.|.|.|||.:...:|::..:.
  Fly   761 KVTGELTVREKIHLRSKKNAKTRRRRQAGSDDEDTDIFILTARAYDLGVPVRFSTTTIRVYPPES 825

  Fly  1250 NDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTS 1314
            ...:.:...|..:....:.|:                      |.|.:.|.....|.:..:.|..
  Fly   826 RKRSVKFVVPGHNPDKAKTEE----------------------TLSALSGGKVYIHNIRPLSPDE 868

  Fly  1315 GVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAA 1379
            .                  |......|||..:...::...|:        :.|||:|        
  Fly   869 P------------------GAKDIPAGNPGIKERSVVTATVI--------YDSSSVV-------- 899

  Fly  1380 LGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKD-----------LIEAAFDIDRHSG 1433
                  .||.|::......||.....:|...|.||.||...           ||..|        
  Fly   900 ------DISEIQQRLSHHNNSYAIMPQDTSSTDTLTPLQTQYKAENKVLFWLLILLA-------- 950

  Fly  1434 NLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEAT 1498
            .||...:|           |..|....|..|...|.|.:|    ||.:..|   |.:.|      
  Fly   951 TLVALTIL-----------ILLLCCICSWCPLYGAATKRI----VNISRTE---DDVHL------ 991

  Fly  1499 PVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQ 1563
                 :|...|....|                  :|.:.|..:.|.|    |.|.:.|.|     
  Fly   992 -----VHREMANGKQT------------------KSVQVAEWMGRRD----AWSAEKPPD----- 1024

  Fly  1564 EYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVA 1628
                              .:|..| |....|..:.                              
  Fly  1025 ------------------TRTKPT-RWEFHDGREQ------------------------------ 1040

  Fly  1629 HIVAVDEDSGDNGQLTYEITGGNGEG-RFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKD 1692
                :|||.| .||   :|    ||| |..|.|              .|:.::..|......|||
  Fly  1041 ----LDEDVG-RGQ---DI----GEGDRRHIQS--------------AEEQQRRVRIKHNRTAKD 1079

  Fly  1693 HGQPEPKKSSLNLHLIVQGSHNNPPRFL--QAVYRATILENVPSGSFVLQVTAKSLHGAENA-NL 1754
                       :|||   ..||:....:  :.||...::||.........:|...::..|.| ..
  Fly  1080 -----------DLHL---NFHNSRTNLINDRDVYMEDVIENRDLAGDREHITRTRVNRQEYARRK 1130

  Fly  1755 SYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASY---------VLPVYVRDANRQSTLSSSAV 1810
            .|:      :::.|:|...   ..|.:.||.|...:         ...::::|.|.:       :
  Fly  1131 QYD------SEVRHIDDDS---MRRHEIDRGSDIDFNTAHNSLKSKRELFIKDGNVE-------I 1179

  Fly  1811 RKQRSSDSIGDTSNGQHFDVATIYITV-----GDVN-------DNS-------------PEFR-- 1848
            .:..:.|.   |.:|.:.|...||:.|     |:::       ||:             |:.:  
  Fly  1180 LQLMTRDK---TRDGLNLDDDNIYVNVPLKPAGNLSHPQLLMVDNTGKEILMRRFIEEQPDGKQI 1241

  Fly  1849 --------PGSCYGLSVPENSEPGVIHTVVASDL----DEGPNADLIYSITGGNLGNKFSIDSSS 1901
                    ||:.|..|:|...:.|   :.:..|.    ..|||: ::||                
  Fly  1242 IREHYQIVPGATYIQSMPNEVQQG---STLKGDTFPLGKSGPNS-IVYS---------------- 1286

  Fly  1902 GELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAP 1966
                  .|:.|....:|..:||.:             .:.::.|..  |.......|..::....
  Fly  1287 ------QLEPEVKVIHTQPVQAGE-------------GVSLDQQMQ--PAVSNQSLTHELEHSLK 1330

  Fly  1967 LGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITTVGKLDRELQASYNFMVLATDG 2031
            ...::::...::.:...||...:.:|.|||   ::.|||..|.|....|...|..      ..||
  Fly  1331 QQNALLRQILMEKEKLENAYTQHEVALETQ---SLPGQSMAIGTQTDCDAGTQTE------GFDG 1386

  Fly  2032 GRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALI-----------------QPGQTLLKV 2079
            ......|...|.:......||.....:.|.|:...|...                 ||.:.::.|
  Fly  1387 VLDPEISLAKPSRRRARSENDESMSEDGYEYVRFNPPNSPEGVYWIKRRRTKKRPRQPRKRIVMV 1451

  Fly  2080 QALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQ 2144
            :.:      ..:|...:..|......|.|:.|.........|:         |.....|:....|
  Fly  1452 EEV------KRKIRTPIKEEEEVQERKKRVPPKKPLRETKTSI---------LRKQLSDESRKDQ 1501

  Fly  2145 SSLGLIELLIGEAPQGTPVLRFQNET---YRVMLKENSPSGTRLLQVVALRSDGRR--QKVQ--- 2201
            |.       .||:..|.   |.::|:   .|.|..|.:.|      :..|.|.|..  :|:|   
  Fly  1502 SR-------NGESQTGN---RHRSESDSHNRDMFMEITDS------MDELASPGSHSIRKIQVEK 1550

  Fly  2202 ---FSFGAGNEDGI-LSLDSLSGE--IRVNKP-HLLDYDRF----------------------ST 2237
               .|.|..:||.. .|:||...|  ||.|.| ...:.:|:                      |:
  Fly  1551 YYKHSDGDFDEDDTEYSIDSDGDEIVIRTNYPSRAQENERYRRQERTYAEPENPVDRKRPARKSS 1615

  Fly  2238 P------SMSALSRGRALHYEEEIDESSEEDPNNS----------TRSQRALTSSSFALTNSQPN 2286
            |      :|..||| |.........::|.|.|:|.          |.:.|.|.|:|..:..|:  
  Fly  1616 PTDSQPEAMPRLSR-RDSSKRGSRKQTSSEPPHNRVSISKYESTVTENGRKLMSTSTEIVGSK-- 1677

  Fly  2287 EIRVVLVARTADAPFLASYAELVIELEDENDNSPKF-------------------------SQKQ 2326
                    |:.......|..||. .||.|..|.||:                         |.|:
  Fly  1678 --------RSLTDRSYQSETELA-GLEHEERNVPKYMEWYYNKKKSSVSGRTSTESSKSQPSSKK 1733

  Fly  2327 FVATVSEGNNKGTFVAQ---VHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDR 2388
            .|....:..:|....||   |..:|...|     ||........:    .|..|.:::.    ||
  Fly  1734 KVGAAEKRVSKTRITAQPKDVEEYDETGG-----RYKPEPAPRKS----PPKGSRLLKE----DR 1785

  Fly  2389 EIRDIYKLKIIATDEGVP--QMTGTATIRVQIVDV--------NDNQPTFPPNNLVTVSEATELG 2443
            .:...:|.| |.||...|  |.:.....|...::|        :...|..||:   ..:...|..
  Fly  1786 ALNKQHKPK-IETDTNHPLLQHSEHRFERENALEVPAAPTKLPHYMYPETPPH---AAAGGKESK 1846

  Fly  2444 AVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIAS 2508
            :...|.::.:....|:..    .|:.|.:.|..|:...|.:|....|:.....|:.:::..:..:
  Fly  1847 SGRESKTSKEAKPKPSPI----RENEVKVSNSKIYVEHRGTGHPTQKQLNASTLEDDHDSGIAMN 1907

  Fly  2509 DAAH---------EARTVLTVRVNDENDNAPVFLAQQPPAY 2540
            ...:         |.::|.::..:|.:....:....:.|.|
  Fly  1908 SLLNSLGRRNPIAEKKSVFSIAYDDVSRVKKINSGGESPQY 1948

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsNP_001285551.1 CA 111..172 CDD:214520
Cadherin_repeat 178..282 CDD:206637
Cadherin_repeat 291..389 CDD:206637
Cadherin_repeat 406..500 CDD:206637
Cadherin_repeat 509..607 CDD:206637 10/34 (29%)
Cadherin_repeat 616..711 CDD:206637 25/113 (22%)
Cadherin_repeat 719..820 CDD:206637 21/124 (17%)
Cadherin_repeat 832..927 CDD:206637 29/107 (27%)
Cadherin_repeat 937..1032 CDD:206637 34/111 (31%)
Cadherin_repeat 1040..1149 CDD:206637 28/114 (25%)
Cadherin_repeat 1158..1252 CDD:206637 29/114 (25%)
Cadherin_repeat 1263..1361 CDD:206637 11/97 (11%)
Cadherin_repeat 1369..1481 CDD:206637 28/122 (23%)
Cadherin_repeat 1489..1598 CDD:206637 16/108 (15%)
Cadherin_repeat 1614..1710 CDD:206637 21/96 (22%)
Cadherin_repeat 1723..1843 CDD:206637 24/141 (17%)
Cadherin_repeat 1853..1948 CDD:206637 16/98 (16%)
Cadherin_repeat 1957..2053 CDD:206637 19/95 (20%)
Cadherin_repeat 2061..2154 CDD:206637 15/109 (14%)
Cadherin_repeat 2170..2318 CDD:206637 46/200 (23%)
Cadherin_repeat 2326..2424 CDD:206637 22/110 (20%)
Cadherin_repeat 2434..2528 CDD:206637 14/102 (14%)
Cadherin_repeat 2549..2641 CDD:206637
Cadherin_repeat 2652..2748 CDD:206637
Cadherin_repeat 2758..2858 CDD:206637
Cadherin_repeat 2866..2960 CDD:206637
Cadherin_repeat 2985..3071 CDD:206637
Cad86CNP_001247033.1 Cadherin_repeat 260..361 CDD:206637 21/104 (20%)
Cadherin_repeat 372..469 CDD:206637 27/96 (28%)
Cadherin_repeat 487..596 CDD:206637 34/113 (30%)
Cadherin_repeat 605..703 CDD:206637 27/112 (24%)
Cadherin_repeat 728..820 CDD:206637 24/91 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24026
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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