Sequence 1: | NP_001285551.1 | Gene: | ds / 33245 | FlyBaseID: | FBgn0284247 | Length: | 3556 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_999974.1 | Gene: | cdh23 / 407978 | ZFINID: | ZDB-GENE-040513-7 | Length: | 3366 | Species: | Danio rerio |
Alignment Length: | 3085 | Identity: | 922/3085 - (29%) |
---|---|---|---|
Similarity: | 1391/3085 - (45%) | Gaps: | 436/3085 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 160 VLVTVKDENDNAPT-----FPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNV- 218
Fly 219 NDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFM--TVNITIQDVND 281
Fly 282 NQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIY 346
Fly 347 INKALDFETKELHELVVVAKDHGE-QPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESA 410
Fly 411 QPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYL-------VIVHLPLDRE--- 465
Fly 466 IVSNYTLSVVAT---DKGTPPLHASKSIF-LRITDVNDNPPEFEQDLYHANVMEVADPGTSV-LQ 525
Fly 526 VLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQT--GLITTRSHI----DCETEPVPQLTVVAR 584
Fly 585 DGGVPPLS---STATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMV 646
Fly 647 NYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDN 711
Fly 712 RPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIV-AGNEAGIFRIDRSTG 775
Fly 776 --EIFVVRPDMLSVRTQP--MHMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYV 836
Fly 837 KEDIPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLN 901
Fly 902 IQAT---LGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSS 963
Fly 964 GQVTYSLVKESGKGLFAIDARSGHLILS------QHLDYESSQ-RHTLIVTATDGGVPSL--STN 1019
Fly 1020 LTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARIT-----------Y 1073
Fly 1074 RIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTR 1138
Fly 1139 VIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPIN--SSFQV 1201
Fly 1202 HPVTGEISTREPLDRELRELYDLVVEARDQGTPV---RSARVPVRIHVSDVNDNAPEIADPQEDV 1263
Fly 1264 VSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVI-RTRVVLDHEE 1327
Fly 1328 RSIYRLGVAA--SDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSL-VFRVREDAALGHVVGSISP 1389
Fly 1390 IERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIR 1454
Fly 1455 ALDTTASNNP--QSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTN 1517
Fly 1518 GDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERL 1582
Fly 1583 QTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEI 1647
Fly 1648 TGGNGEGRFRINSQTGII-ELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQG 1711
Fly 1712 SHNNPPRFLQAV--YRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRG 1774
Fly 1775 IITTR-GQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVG 1838
Fly 1839 DVNDNSPEFRPGSCYGLSVPE--NSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSS 1901
Fly 1902 GEL---SARPLDRE-QHSRYTLQIQASDRGQPKSRQGHCNI---------TIFVE--DQNDNAPR 1951
Fly 1952 FKLSKYTG--SVQEDAPLGTSVVQISAVDADLGVNARLVYSL-ANETQWQFAIDGQSGLITTVGK 2013
Fly 2014 ---LDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVP--ALIQPG 2073
Fly 2074 QTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARD 2138
Fly 2139 KGNPPQ-----SSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLL----QVVALRSD 2194
Fly 2195 -GRRQKVQFSFGAGNEDGILSLDSLSGEIRVNKPHLLDYDRFSTPSMSALSRGRALHYEEEIDES 2258
Fly 2259 SEEDPNNSTRSQRALTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFS 2323
Fly 2324 QKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDR 2388
Fly 2389 EIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTF-PPNNLVTVSEATELGAVITSISAN 2452
Fly 2453 DVDTYPALTYRLGAESTVDIENMSI------FALDRYSGKLVLKRRLDYELQQEYELDVIASDAA 2511
Fly 2512 HEA--------RTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDA 2568
Fly 2569 DSEGNNSKVIYIIEPAQEGFSVH---PSNGVV----SVNMSRLQPAVSSSGDYFVRIIAKDAGKP 2626
Fly 2627 A--LKSSTLLR-VQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSL------AII 2682
Fly 2683 AGNEESAFELLQSKA-IVLVKPLDRERNDLYKL-RLVLSHPHGPPLISSLNSSSGISVIITILDA 2745
Fly 2746 NDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTG 2810
Fly 2811 VLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKF--PLTEYVHFLAE 2873
Fly 2874 NEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYD 2938
Fly 2939 MELLASDMGGK---KASVAVRVEIESRDEFTPQFTERTYRFVLP-AAVALPQ----GYVVGQVT- 2994
Fly 2995 ATDSDSGPDGRVVYQLSAPHS--HFKVNRSSGAVLIKRKLKLDGDGDGNLYMDGRDI---SLVIS 3054
Fly 3055 ASSGRH-----NSLSSMAVVEIALDPLAHP 3079 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ds | NP_001285551.1 | CA | 111..172 | CDD:214520 | 3/11 (27%) |
Cadherin_repeat | 178..282 | CDD:206637 | 31/106 (29%) | ||
Cadherin_repeat | 291..389 | CDD:206637 | 35/98 (36%) | ||
Cadherin_repeat | 406..500 | CDD:206637 | 28/107 (26%) | ||
Cadherin_repeat | 509..607 | CDD:206637 | 27/107 (25%) | ||
Cadherin_repeat | 616..711 | CDD:206637 | 28/94 (30%) | ||
Cadherin_repeat | 719..820 | CDD:206637 | 31/105 (30%) | ||
Cadherin_repeat | 832..927 | CDD:206637 | 31/97 (32%) | ||
Cadherin_repeat | 937..1032 | CDD:206637 | 30/103 (29%) | ||
Cadherin_repeat | 1040..1149 | CDD:206637 | 27/119 (23%) | ||
Cadherin_repeat | 1158..1252 | CDD:206637 | 35/98 (36%) | ||
Cadherin_repeat | 1263..1361 | CDD:206637 | 43/100 (43%) | ||
Cadherin_repeat | 1369..1481 | CDD:206637 | 24/114 (21%) | ||
Cadherin_repeat | 1489..1598 | CDD:206637 | 30/108 (28%) | ||
Cadherin_repeat | 1614..1710 | CDD:206637 | 30/96 (31%) | ||
Cadherin_repeat | 1723..1843 | CDD:206637 | 39/122 (32%) | ||
Cadherin_repeat | 1853..1948 | CDD:206637 | 36/111 (32%) | ||
Cadherin_repeat | 1957..2053 | CDD:206637 | 39/101 (39%) | ||
Cadherin_repeat | 2061..2154 | CDD:206637 | 28/99 (28%) | ||
Cadherin_repeat | 2170..2318 | CDD:206637 | 36/152 (24%) | ||
Cadherin_repeat | 2326..2424 | CDD:206637 | 39/97 (40%) | ||
Cadherin_repeat | 2434..2528 | CDD:206637 | 28/107 (26%) | ||
Cadherin_repeat | 2549..2641 | CDD:206637 | 27/101 (27%) | ||
Cadherin_repeat | 2652..2748 | CDD:206637 | 28/103 (27%) | ||
Cadherin_repeat | 2758..2858 | CDD:206637 | 21/99 (21%) | ||
Cadherin_repeat | 2866..2960 | CDD:206637 | 24/96 (25%) | ||
Cadherin_repeat | 2985..3071 | CDD:206637 | 28/100 (28%) | ||
cdh23 | NP_999974.1 | Cadherin_repeat | 48..134 | CDD:206637 | 31/103 (30%) |
Cadherin_repeat | 142..237 | CDD:206637 | 35/98 (36%) | ||
Cadherin_repeat | 246..350 | CDD:206637 | 29/112 (26%) | ||
Cadherin_repeat | 358..460 | CDD:206637 | 27/108 (25%) | ||
Cadherin_repeat | 469..561 | CDD:206637 | 28/94 (30%) | ||
Cadherin_repeat | 570..671 | CDD:206637 | 32/107 (30%) | ||
Cadherin_repeat | 679..778 | CDD:206637 | 31/98 (32%) | ||
Cadherin_repeat | 786..890 | CDD:206637 | 30/105 (29%) | ||
Cadherin_repeat | 898..994 | CDD:206637 | 26/118 (22%) | ||
Cadherin_repeat | 1003..1102 | CDD:206637 | 35/99 (35%) | ||
Cadherin_repeat | 1110..1206 | CDD:206637 | 42/102 (41%) | ||
Cadherin_repeat | 1221..1311 | CDD:206637 | 24/107 (22%) | ||
Cadherin_repeat | 1321..1417 | CDD:206637 | 30/107 (28%) | ||
Cadherin_repeat | 1428..1526 | CDD:206637 | 30/101 (30%) | ||
Cadherin_repeat | 1536..1633 | CDD:206637 | 39/119 (33%) | ||
Cadherin_repeat | 1641..1743 | CDD:206637 | 36/112 (32%) | ||
Cadherin_repeat | 1755..1850 | CDD:206637 | 38/97 (39%) | ||
Cadherin_repeat | 1858..1958 | CDD:206637 | 29/105 (28%) | ||
Cadherin_repeat | 1966..2068 | CDD:206637 | 36/152 (24%) | ||
Cadherin_repeat | 2076..2172 | CDD:206637 | 38/96 (40%) | ||
Cadherin_repeat | 2181..2292 | CDD:206637 | 28/110 (25%) | ||
Cadherin_repeat | 2304..2401 | CDD:206637 | 27/104 (26%) | ||
Cadherin_repeat | 2410..2507 | CDD:206637 | 27/101 (27%) | ||
Cadherin_repeat | 2516..2610 | CDD:206637 | 21/101 (21%) | ||
Cadherin_repeat | 2624..2722 | CDD:206637 | 25/97 (26%) | ||
Cadherin_repeat | 2738..2849 | CDD:206637 | 32/114 (28%) | ||
Cadherin_repeat | 2858..2959 | CDD:206637 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3B9B2 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100175 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.710 |