Sequence 1: | NP_001285551.1 | Gene: | ds / 33245 | FlyBaseID: | FBgn0284247 | Length: | 3556 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001021650.1 | Gene: | hmr-1 / 173007 | WormBaseID: | WBGene00001980 | Length: | 2920 | Species: | Caenorhabditis elegans |
Alignment Length: | 2804 | Identity: | 665/2804 - (23%) |
---|---|---|---|
Similarity: | 1080/2804 - (38%) | Gaps: | 732/2804 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 78 QERERKLEVFEGVAVDYQIGYIGDFGGIDSGPPYIIVAEAGVETDLAIDRATGEIRTKVKLDRET 142
Fly 143 RASYSLVAIPLSG------RNIRVLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDL 201
Fly 202 DLEPYNTQRYNIVSGNVNDAFRLSSHRERD-GVLYLDLQI----------------SGFLDRETT 249
Fly 250 PGYSLLIEALDGGTPPLRGFMTVNITIQDV--NDNQPIFNQSRYFATVPENATVGTSVLQV---- 308
Fly 309 YASDTDADENGLVEYAI-NRRQSDKEQMFRIDPRTGAIYINKALDFE---TKELHELVVVAK-DH 368
Fly 369 GEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPD----SKTE 429
Fly 430 YA--NVNVTLNGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTP-PLHASKSIF 491
Fly 492 LRITDVNDNPPEF-EQDLYHANVMEVADPGTSVLQVLAH--DRDEGLNSALTYSLAETPETHAQ- 552
Fly 553 --WFQIDPQTGLITTRSHID----CETEPVPQLTVVARDGG---VPPL---SSTATVLVTIHDVN 605
Fly 606 DNEPIFDQSFYNVSVA-------ENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVR 663
Fly 664 SA------SGEICIAGELDFER--RSSYEFPVLATDRGG--LSTTAMIKMQLTDVNDNRPVFYPR 718
Fly 719 EYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRI----VAG----NEAGIFR-IDRST 774
Fly 775 GEIFVVRPDMLSVRTQPMHMLNISATDGG---NLRSNADAVVFLSIIDAMQRPPIFEKA---RYN 833
Fly 834 YYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSI-YSGDPDG-------YFSIETNSGN----IRI 886
Fly 887 AKPLDHEAKSQVLLNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAEL----- 946
Fly 947 -----GAPLYAAHAHDKDS-GSSGQVTYSLVKE-SGKGL--FAIDARSGHLILSQHLDYESSQRH 1002
Fly 1003 TLIVTATDGGVPSL-------STNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNA 1060
Fly 1061 SDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLA 1125
Fly 1126 TDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFR-IEENLRRGSVVGVVTASDLDLGENAA-I 1188
Fly 1189 RYSL--LPINSSFQVHPVTGEISTREPLDRELR---ELYDLVVEARDQGTPVRSARVPVRIHVSD 1248
Fly 1249 VNDNAPEIADPQEDVVSVREEQPP----GTEVVRVRAVDRDH--GQNASITYSIVKGRDSDGHGL 1307
Fly 1308 FSIDPTSGVIRTRVVLDHE---ERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSS 1369
Fly 1370 LVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGN 1434
Fly 1435 LVVARL---LDREVQSE---FRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQ 1493
Fly 1494 VSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLD 1558
Fly 1559 FEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPH-FVSPNSSGGKTASLFISDATR 1622
Fly 1623 IGEV-VAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNL 1686
Fly 1687 IIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAEN 1751
Fly 1752 ANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSS 1816
Fly 1817 DSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPG-----VIHTVVASDLDE 1876
Fly 1877 GPNADLIY----SITGGNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCN 1937
Fly 1938 ITIFVEDQNDNA-PRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAI 2001
Fly 2002 D-------GQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPV---------------- 2043
Fly 2044 QINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALDAD-------------LGANAEIVYS 2095
Fly 2096 LNA--ENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQSSLGLI-----ELL 2153
Fly 2154 IGEAPQGTPVLRFQN--ETYRVMLKENSPSGTRLLQVVALRSDGRRQKVQFSFGAGNEDGILSLD 2216
Fly 2217 SLSGEIRVNKPHLLDYDRFSTPSMSALSRGRALHYEEEIDESSEEDPNNSTRSQRALTSSSFALT 2281
Fly 2282 NSQPNEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHA 2346
Fly 2347 FDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGT 2411
Fly 2412 ATIR--VQIVDVNDNQ-----PTFPPNNLVTVSEATELGAVI--TSISANDVDTYPALTYRLGAE 2467
Fly 2468 STVDIENMSIFALDRYSGKLVLK-------------RRLDYELQQEYELDVIASDAAHEARTVLT 2519
Fly 2520 VRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPA 2584
Fly 2585 QEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFL 2649
Fly 2650 QNQYRAQIS 2658 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ds | NP_001285551.1 | CA | 111..172 | CDD:214520 | 15/66 (23%) |
Cadherin_repeat | 178..282 | CDD:206637 | 21/122 (17%) | ||
Cadherin_repeat | 291..389 | CDD:206637 | 37/106 (35%) | ||
Cadherin_repeat | 406..500 | CDD:206637 | 24/100 (24%) | ||
Cadherin_repeat | 509..607 | CDD:206637 | 42/112 (38%) | ||
Cadherin_repeat | 616..711 | CDD:206637 | 27/111 (24%) | ||
Cadherin_repeat | 719..820 | CDD:206637 | 29/112 (26%) | ||
Cadherin_repeat | 832..927 | CDD:206637 | 27/106 (25%) | ||
Cadherin_repeat | 937..1032 | CDD:206637 | 30/115 (26%) | ||
Cadherin_repeat | 1040..1149 | CDD:206637 | 33/108 (31%) | ||
Cadherin_repeat | 1158..1252 | CDD:206637 | 27/100 (27%) | ||
Cadherin_repeat | 1263..1361 | CDD:206637 | 34/106 (32%) | ||
Cadherin_repeat | 1369..1481 | CDD:206637 | 28/117 (24%) | ||
Cadherin_repeat | 1489..1598 | CDD:206637 | 32/108 (30%) | ||
Cadherin_repeat | 1614..1710 | CDD:206637 | 10/96 (10%) | ||
Cadherin_repeat | 1723..1843 | CDD:206637 | 19/119 (16%) | ||
Cadherin_repeat | 1853..1948 | CDD:206637 | 24/103 (23%) | ||
Cadherin_repeat | 1957..2053 | CDD:206637 | 22/118 (19%) | ||
Cadherin_repeat | 2061..2154 | CDD:206637 | 17/112 (15%) | ||
Cadherin_repeat | 2170..2318 | CDD:206637 | 31/147 (21%) | ||
Cadherin_repeat | 2326..2424 | CDD:206637 | 16/99 (16%) | ||
Cadherin_repeat | 2434..2528 | CDD:206637 | 13/108 (12%) | ||
Cadherin_repeat | 2549..2641 | CDD:206637 | 19/91 (21%) | ||
Cadherin_repeat | 2652..2748 | CDD:206637 | 3/7 (43%) | ||
Cadherin_repeat | 2758..2858 | CDD:206637 | |||
Cadherin_repeat | 2866..2960 | CDD:206637 | |||
Cadherin_repeat | 2985..3071 | CDD:206637 | |||
hmr-1 | NP_001021650.1 | Cadherin_repeat | 431..521 | CDD:206637 | 16/93 (17%) |
Cadherin_repeat | 534..638 | CDD:206637 | 37/107 (35%) | ||
Cadherin_repeat | 647..742 | CDD:206637 | 23/103 (22%) | ||
Cadherin_repeat | 752..861 | CDD:206637 | 42/113 (37%) | ||
Cadherin_repeat | 875..975 | CDD:206637 | 27/106 (25%) | ||
Cadherin_repeat | 983..1085 | CDD:206637 | 29/111 (26%) | ||
Cadherin_repeat | 1103..1206 | CDD:206637 | 26/103 (25%) | ||
Cadherin_repeat | 1216..1331 | CDD:206637 | 30/116 (26%) | ||
Cadherin_repeat | 1340..1432 | CDD:206637 | 33/107 (31%) | ||
Cadherin_repeat | 1443..1542 | CDD:206637 | 26/98 (27%) | ||
Cadherin_repeat | 1553..1657 | CDD:206637 | 34/104 (33%) | ||
Cadherin_repeat | 1666..1768 | CDD:206637 | 28/116 (24%) | ||
Cadherin_repeat | 1779..1868 | CDD:206637 | 32/104 (31%) | ||
EGF_CA | 2250..2283 | CDD:238011 | 9/45 (20%) | ||
LamG | 2286..2459 | CDD:238058 | 49/263 (19%) | ||
LamG | 2533..2679 | CDD:304605 | 32/128 (25%) | ||
Cadherin_C | 2812..>2919 | CDD:279398 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 55 | 1.000 | Domainoid score | I7413 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100175 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |