DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ds and LOC100006777

DIOPT Version :9

Sequence 1:NP_001285551.1 Gene:ds / 33245 FlyBaseID:FBgn0284247 Length:3556 Species:Drosophila melanogaster
Sequence 2:XP_021335004.1 Gene:LOC100006777 / 100006777 -ID:- Length:966 Species:Danio rerio


Alignment Length:896 Identity:248/896 - (27%)
Similarity:386/896 - (43%) Gaps:141/896 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 IGYIGDFGGIDSGP----PYIIVAEAGVETDLAIDRATGEIRTKVKLDRE------TRASYSLVA 150
            :|.|.:..|:|:..    .:.||:.|..:. |.::...|.:....::|||      ...|:.|..
Zfish    41 VGNIAEDLGLDTNKLSVRRFRIVSGAKRQY-LEVNLENGVLFVNERIDREELCEQNPYCSFHLQV 104

  Fly   151 I---PLSGRNIRVLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYN 212
            :   ||  ...||.|.:.|.|||:|.||.:..:::..|:.....:..|..|:|||:...:.:.|.
Zfish   105 VIENPL--ELYRVEVEIFDVNDNSPVFPWSEFNLDISESAAPGSRFPLESAQDLDVADNSLRSYL 167

  Fly   213 IVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQ 277
            :   :||:.|.|......||..:.:|.:...||||....:.:::.|:|||:|...|...:|||:.
Zfish   168 L---SVNEHFVLDVQTRSDGSKFAELILESPLDREQQKTHLMVLTAVDGGSPERSGTAQINITVL 229

  Fly   278 DVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDK-EQMFRIDPR 341
            |.|||.|:|:|:.|...:.|||..||.|:::.|:|.|...||.:.|:.:.....: .::|.:|.|
Zfish   230 DANDNAPVFDQNFYKVRLAENAPRGTVVIKLNATDLDEGPNGEITYSFSGHAPMRVRELFSVDSR 294

  Fly   342 TGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKI 406
            ||.|.:...:|:|...:||:.|.|||.|...:.....|.:.:.|||||.|  .||..|  .|..:
Zfish   295 TGEIKVKGLIDYEKARMHEIYVQAKDKGPSAVAVHCKVMVNIIDVNDNLP--EVILTS--VSTPV 355

  Fly   407 SESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGH--FALTTRDNSIYLVIVHLPLDREIVSN 469
            .|.|.||..:|.|||.|.|| .|..||:..:   ..|  |.|.:...:.|.::....||||.:|.
Zfish   356 QEDAPPGTVIAVISVMDKDS-GENGNVDCEI---PHHVPFQLHSSFKNYYTLVTCDFLDRESISE 416

  Fly   470 YTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEG 534
            |.:::.|.|.|:|||...|:|.::::|:|||.|.|:|..|...:.|...||.|:..:.|.|.|..
Zfish   417 YNITLTARDMGSPPLFTRKTILVQVSDINDNAPRFKQPSYTVYLTENNAPGASICTITAQDADAD 481

  Fly   535 LNSALTYSLAETPETH----AQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTA 595
            .||.|:||:.|. :.|    :.:..|:...|.|......|.|.....|:.|.|.|.|.|||.:..
Zfish   482 QNSYLSYSILEN-DIHGMPVSTYVSINSDNGNIYALRSFDHEQLRNFQIVVQAEDAGFPPLRANV 545

  Fly   596 TVLVTIHDVNDNEPIF------DQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGF 654
            ||.|.:.|.|||.|:.      :.:...|.|......|..:.|::|.|.|.|.|:.:.|.:.:. 
Zfish   546 TVNVFVLDQNDNPPVIVSPMPENDTAAVVVVPRYVDAGYLVAKITAMDADAGQNSRLFYEVLQA- 609

  Fly   655 KHLTEFEVRSASGEI-CIAGELDFERRSSYEFPVLATDRG--GLSTTAMIKMQLTDVNDNRPVFY 716
            ...:.|.|...:||| .|...:|.:.| .:...||..|.|  .||.||.|.:.:.|         
Zfish   610 TDASLFSVALYTGEIRTIRRLMDNDPR-RHRLVVLVKDNGQPPLSATASIMLSVVD--------- 664

  Fly   717 PREYKVSLRESPKASSQASSTPIVAVVATDPDYG---------NFGQVSYRIVA----------- 761
                           |...|:|....:|..|.|.         :.|.||:..:.           
Zfish   665 ---------------SAPESSPDFGDLALSPHYRSNLTLYLIVSLGAVSFTFLVAIIVLASIKGC 714

  Fly   762 --GNEAGIFRIDRSTGEIFVVRPDMLSVRTQP----MHMLNISATDGGNL--------RSNADAV 812
              ||....|....|..|  |::...|::...|    ....|.:...|.|.        .|:....
Zfish   715 KDGNSCCGFHTKDSESE--VIKKSNLNIHISPGSIKRDQFNANNPMGPNYCYKMCLTPESSKSDF 777

  Fly   813 VFLSIIDAMQRP--PIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHR----SPVRYSIYSGDP 871
            :||       :|  |....:|.|  :|| |...|:..|  :.|..::.|    ||..:.      
Zfish   778 MFL-------KPCSPTGTSSRNN--IKE-IENKTLTWS--SGSHSISTRNGTTSPNEFK------ 824

  Fly   872 DGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPPV-----YGHTQV 917
                  :.|.........|::..:|...||...||....:     |.:|.|
Zfish   825 ------QANRDRTLTKNQLNYTYRSNTPLNTGRTLQRRLIQDSDNYSYTSV 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsNP_001285551.1 CA 111..172 CDD:214520 19/69 (28%)
Cadherin_repeat 178..282 CDD:206637 29/103 (28%)
Cadherin_repeat 291..389 CDD:206637 32/98 (33%)
Cadherin_repeat 406..500 CDD:206637 34/95 (36%)
Cadherin_repeat 509..607 CDD:206637 33/101 (33%)
Cadherin_repeat 616..711 CDD:206637 28/97 (29%)
Cadherin_repeat 719..820 CDD:206637 23/134 (17%)
Cadherin_repeat 832..927 CDD:206637 20/95 (21%)
Cadherin_repeat 937..1032 CDD:206637
Cadherin_repeat 1040..1149 CDD:206637
Cadherin_repeat 1158..1252 CDD:206637
Cadherin_repeat 1263..1361 CDD:206637
Cadherin_repeat 1369..1481 CDD:206637
Cadherin_repeat 1489..1598 CDD:206637
Cadherin_repeat 1614..1710 CDD:206637
Cadherin_repeat 1723..1843 CDD:206637
Cadherin_repeat 1853..1948 CDD:206637
Cadherin_repeat 1957..2053 CDD:206637
Cadherin_repeat 2061..2154 CDD:206637
Cadherin_repeat 2170..2318 CDD:206637
Cadherin_repeat 2326..2424 CDD:206637
Cadherin_repeat 2434..2528 CDD:206637
Cadherin_repeat 2549..2641 CDD:206637
Cadherin_repeat 2652..2748 CDD:206637
Cadherin_repeat 2758..2858 CDD:206637
Cadherin_repeat 2866..2960 CDD:206637
Cadherin_repeat 2985..3071 CDD:206637
LOC100006777XP_021335004.1 Cadherin_2 26..108 CDD:311943 14/67 (21%)
Cadherin_repeat 133..234 CDD:206637 29/103 (28%)
Cadherin_repeat 243..342 CDD:206637 32/98 (33%)
Cadherin_repeat 355..447 CDD:206637 34/95 (36%)
Cadherin_repeat 455..557 CDD:206637 33/102 (32%)
Cadherin_repeat 573..664 CDD:206637 27/92 (29%)
Cadherin_C_2 685..781 CDD:318652 17/104 (16%)
Cadherin_tail <884..950 CDD:318236
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 62 1.000 Domainoid score I10294
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.000

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